FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037829 through 18771 annotations produced 3 hits

(CG14691):

Annotation Number : CG14691
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037829
Gbrowse : chr3R:6579051-6581356 (-) // 100.0 //
Probeset : 1626418_a_at
Accessions : protein= NP_650012; /// NP_788633;, nucleotide= NM_141755; /// NM_176456;
Pathway : 0008021 // synaptic vesicle // inferred from sequence or structural similarity
FlyMine data for FBgn0037829.
BDGP gene expression has embryonic in situ data for CG14691: 6 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0037829 available for purchase.
VDRC has 3 RNAi stocks for FBgn0037829 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.10	Down
Head	0 ± 0	0 of 4	0.00	Down
Eye	0 ± 0	0 of 4	0.03	Down
Thoracicoabdominal ganglion	1 ± 1	0 of 4	0.10	Down
Salivary gland	6 ± 4	0 of 4	0.32	None
Crop	2 ± 0	0 of 4	0.10	Down
Midgut	2 ± 0	0 of 4	0.10	Down
Tubule	84 ± 7	4 of 4	4.20	Up
Hindgut	2 ± 1	0 of 4	0.10	Down
Heart	1 ± 0	0 of 4	0.05	Down
Fat body	0 ± 0	0 of 4	0.03	Down
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	307 ± 9	4 of 4	15.10	Up
Male accessory glands	2 ± 1	0 of 4	0.10	Down
Virgin spermatheca	0 ± 0	0 of 4	0.02	Down
Mated spermatheca	2 ± 1	0 of 4	0.12	Down
Adult carcass	2 ± 0	0 of 4	0.10	Down
Larval CNS	0 ± 0	0 of 4	0.02	Down
Larval Salivary gland	1 ± 1	0 of 4	0.08	Down
Larval midgut	1 ± 0	0 of 4	0.06	Down
Larval tubule	16 ± 1	0 of 4	0.80	None
Larval hindgut	1 ± 0	0 of 4	0.05	Down
Larval fat body	54 ± 29	2 of 4	2.70	None
Larval trachea	2 ± 1	0 of 4	0.14	Down
Larval carcass	1 ± 0	0 of 4	0.09	Down
S2 cells (growing)	1 ± 0	0 of 4	0.06	Down
Whole fly	20 ± 1	1 of 4

(CG14691):

Annotation Number : CG14691
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037829
Gbrowse : chr3R:6579051-6581356 (-) // 100.0 //
Probeset : 1623988_at
Accessions : protein= NP_650012; /// NP_788633;, nucleotide= NM_141755; /// NM_176456;
Pathway : 0008021 // synaptic vesicle // inferred from sequence or structural similarity
FlyMine data for FBgn0037829.
BDGP gene expression has embryonic in situ data for CG14691: 6 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0037829 available for purchase.
VDRC has 3 RNAi stocks for FBgn0037829 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	1.00	None
Head	0 ± 0	0 of 4	0.20	None
Eye	0 ± 0	0 of 4	0.30	None
Thoracicoabdominal ganglion	0 ± 0	0 of 4	0.30	None
Salivary gland	6 ± 3	0 of 4	2.67	None
Crop	0 ± 0	0 of 4	0.30	None
Midgut	4 ± 1	0 of 4	1.80	None
Tubule	17 ± 0	3 of 4	7.00	Up
Hindgut	2 ± 1	0 of 4	1.10	None
Heart	1 ± 0	0 of 4	0.39	None
Fat body	1 ± 1	0 of 4	0.61	None
Ovary	0 ± 0	0 of 4	0.20	None
Testis	18 ± 1	4 of 4	7.40	Up
Male accessory glands	1 ± 0	0 of 4	0.60	None
Virgin spermatheca	1 ± 0	0 of 4	0.74	None
Mated spermatheca	0 ± 0	0 of 4	0.35	None
Adult carcass	3 ± 1	0 of 4	1.20	None
Larval CNS	1 ± 0	0 of 4	0.42	None
Larval Salivary gland	2 ± 1	0 of 4	1.13	None
Larval midgut	1 ± 0	0 of 4	0.37	None
Larval tubule	4 ± 1	0 of 4	1.70	None
Larval hindgut	0 ± 0	0 of 4	0.16	None
Larval fat body	1 ± 0	0 of 4	0.60	None
Larval trachea	1 ± 1	0 of 4	0.72	None
Larval carcass	0 ± 0	0 of 4	0.18	None
S2 cells (growing)	0 ± 0	0 of 4	0.30	None
Whole fly	2 ± 0	0 of 4

(CG14691):

Annotation Number : CG14691
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037829
Gbrowse : chr3R:6579051-6581356 (-) // 100.0 //
Probeset : 1634387_at
Accessions : protein= NP_650012; /// NP_788633;, nucleotide= NM_141755; /// NM_176456;
Pathway : 0008021 // synaptic vesicle // inferred from sequence or structural similarity
FlyMine data for FBgn0037829.
BDGP gene expression has embryonic in situ data for CG14691: 6 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0037829 available for purchase.
VDRC has 3 RNAi stocks for FBgn0037829 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	0.20	None
Head	2 ± 1	0 of 4	0.20	Down
Eye	1 ± 0	0 of 4	0.20	Down
Thoracicoabdominal ganglion	2 ± 1	1 of 4	0.30	Down
Salivary gland	2 ± 1	0 of 4	0.26	Down
Crop	2 ± 1	0 of 4	0.30	Down
Midgut	0 ± 0	0 of 4	0.10	Down
Tubule	31 ± 3	4 of 4	3.20	Up
Hindgut	1 ± 0	0 of 4	0.10	Down
Heart	0 ± 0	0 of 4	0.03	Down
Fat body	4 ± 3	0 of 4	0.44	None
Ovary	1 ± 0	1 of 4	0.10	Down
Testis	182 ± 4	4 of 4	18.90	Up
Male accessory glands	5 ± 1	0 of 4	0.50	None
Virgin spermatheca	0 ± 0	0 of 4	0.05	Down
Mated spermatheca	1 ± 0	0 of 4	0.10	Down
Adult carcass	2 ± 1	0 of 4	0.30	Down
Larval CNS	0 ± 0	0 of 4	0.03	Down
Larval Salivary gland	3 ± 1	0 of 4	0.34	None
Larval midgut	0 ± 0	0 of 4	0.05	Down
Larval tubule	9 ± 0	2 of 4	1.00	None
Larval hindgut	0 ± 0	0 of 4	0.08	Down
Larval fat body	28 ± 12	3 of 4	3.00	None
Larval trachea	0 ± 0	0 of 4	0.10	Down
Larval carcass	0 ± 0	0 of 4	0.08	Down
S2 cells (growing)	1 ± 0	0 of 4	0.13	Down
Whole fly	9 ± 2	3 of 4

Looking for FBgn0037829. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720