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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0037832 through 18771 annotations produced 1 hits


Annotation Number : CG14686
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037832
Gbrowse : chr3R:6605296-6606451 (+) // 100.0 //
Probeset : 1641731_at
Accessions : protein= NP_650016;, nucleotide= NM_141759;
FlyMine data for FBgn0037832.
VDRC has 4 RNAi stocks for FBgn0037832 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 00 of 4 0.30None
Head4 00 of 4 0.60None
Eye6 23 of 4 0.81None
Thoracicoabdominal ganglion4 10 of 4 0.50None
Salivary gland12 20 of 4 1.46None
Crop16 14 of 4 2.00Up
Midgut7 20 of 4 0.90None
Tubule6 10 of 4 0.70None
Hindgut9 03 of 4 1.20None
Heart5 00 of 4 0.69None
Fat body3 30 of 4 0.48None
Ovary2 00 of 4 0.30None
Testis1 00 of 4 0.20None
Male accessory glands10 20 of 4 1.20None
Virgin spermatheca5 20 of 4 0.63None
Mated spermatheca4 10 of 4 0.50None
Adult carcass25 63 of 4 3.00None
Larval CNS3 20 of 4 0.44None
Larval Salivary gland8 11 of 4 1.08None
Larval midgut7 10 of 4 0.96None
Larval tubule6 21 of 4 0.80None
Larval hindgut7 11 of 4 0.88None
Larval fat body6 20 of 4 0.80None
Larval trachea5 00 of 4 0.62None
Larval carcass17 14 of 4 2.09Up
S2 cells (growing)5 00 of 4 0.62None
Whole fly8 22 of 4

Looking for FBgn0037832. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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