Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037841 through 18771 annotations produced 1 hits



(CG4565):

Annotation Number : CG4565
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037841
Gbrowse : chr3R:6678463-6679135 (+) // 100.0 //
Probeset : 1626640_at
Accessions : protein= NP_001097743;, nucleotide= NM_001104273;
Pathway : 0005634 // nucleus // inferred from electronic annotation
Interpro : 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred
FlyMine data for FBgn0037841.
Homophila reports that CG4565 is a close match (6e-15) to human gene EHMT1;EUHMTASE1 (NP_079033), a gene associated with Chromosome 9q subtelomeric deletion syndrome, 610253 (3).
TRiP has 2 RNAi stocks for FBgn0037841 available for purchase.
VDRC has 1 RNAi stocks for FBgn0037841 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain21 14 of 4 3.10Up
Head12 13 of 4 1.80None
Eye18 14 of 4 2.66Up
Thoracicoabdominal ganglion25 24 of 4 3.70Up
Salivary gland4 10 of 4 0.58None
Crop17 23 of 4 2.50Up
Midgut3 00 of 4 0.50None
Tubule1 00 of 4 0.30Down
Hindgut5 00 of 4 0.70None
Heart6 11 of 4 0.99None
Fat body3 20 of 4 0.48None
Ovary12 04 of 4 1.70Up
Testis2 10 of 4 0.40None
Male accessory glands25 14 of 4 3.70Up
Virgin spermatheca4 10 of 4 0.71None
Mated spermatheca9 01 of 4 1.40None
Adult carcass5 10 of 4 0.70None
Larval CNS17 14 of 4 2.47Up
Larval Salivary gland12 00 of 4 1.73Up
Larval midgut1 00 of 4 0.17Down
Larval tubule3 10 of 4 0.50None
Larval hindgut5 10 of 4 0.78None
Larval fat body1 00 of 4 0.20Down
Larval trachea10 30 of 4 1.51None
Larval carcass9 10 of 4 1.39None
S2 cells (growing)17 13 of 4 2.57Up
Whole fly7 10 of 4

Looking for FBgn0037841. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime