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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037842 through 18771 annotations produced 1 hits



(CG6567):

Annotation Number : CG6567
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037842
Gbrowse : chr3R:6679375-6680144 (-) // 100.0 //
Probeset : 1630131_at
Accessions : protein= NP_001097742;, nucleotide= NM_001104272;
Interpro : 0004622 // lysophospholipase activity // inferred from sequence or structural similarity /// 0004622 // lysophospholipas
FlyMine data for FBgn0037842.
BioGrid reports that CG6567 interacts with CG6949 CG9025 .
TRiP has 1 RNAi stocks for FBgn0037842 available for purchase.
VDRC has 3 RNAi stocks for FBgn0037842 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain77 14 of 4 0.50Down
Head143 84 of 4 0.90None
Eye83 54 of 4 0.51Down
Thoracicoabdominal ganglion57 34 of 4 0.40Down
Salivary gland122 54 of 4 0.75Down
Crop256 84 of 4 1.60Up
Midgut243 84 of 4 1.50Up
Tubule114 24 of 4 0.70Down
Hindgut131 24 of 4 0.80Down
Heart235 134 of 4 1.44Up
Fat body315 374 of 4 1.93Up
Ovary202 74 of 4 1.20Up
Testis91 64 of 4 0.60Down
Male accessory glands78 24 of 4 0.50Down
Virgin spermatheca124 44 of 4 0.76Down
Mated spermatheca109 84 of 4 0.67Down
Adult carcass203 74 of 4 1.20Up
Larval CNS135 64 of 4 0.83Down
Larval Salivary gland248 174 of 4 1.52Up
Larval midgut243 124 of 4 1.49Up
Larval tubule310 64 of 4 1.90Up
Larval hindgut154 54 of 4 0.95None
Larval fat body258 224 of 4 1.60Up
Larval trachea146 104 of 4 0.90None
Larval carcass128 114 of 4 0.79None
S2 cells (growing)148 44 of 4 0.91None
Whole fly163 84 of 4

Looking for FBgn0037842. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime