FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037847 through 18771 annotations produced 2 hits

methionine-R-sulfoxide reductase (SelR):

Annotation Number : CG6584
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037847
Gbrowse : chr3R:6689070-6694285 (-) // 100.0 //
Probeset : 1630886_at
Accessions : protein= NP_001138036; /// NP_650030; /// NP_731522; /// NP_731523; /// NP_731524; /// NP_731525; /// NP_996195;, nucleotide= NM_001144564; /// NM_141773; /// NM_169368; /// NM_169369; /// NM_169370; /// NM_169371; /// NM_206473;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotatio
Interpro : 0000318 // protein-methionine-R-oxide reductase activity // inferred from direct assay /// 0000318 // protein-methionine
FlyMine data for FBgn0037847.
BDGP gene expression has embryonic in situ data for SelR: 13 pix of staining in 4 body parts.
VDRC has 1 RNAi stocks for FBgn0037847 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	213 ± 5	4 of 4	4.10	Up
Head	87 ± 11	4 of 4	1.70	None
Eye	109 ± 5	4 of 4	2.11	Up
Thoracicoabdominal ganglion	151 ± 17	4 of 4	2.90	Up
Salivary gland	80 ± 5	4 of 4	1.55	Up
Crop	55 ± 0	4 of 4	1.10	Up
Midgut	38 ± 2	0 of 4	0.70	Down
Tubule	717 ± 14	4 of 4	13.70	Up
Hindgut	47 ± 3	4 of 4	0.90	None
Heart	35 ± 2	4 of 4	0.68	Down
Fat body	23 ± 5	0 of 4	0.45	Down
Ovary	42 ± 2	4 of 4	0.80	Down
Testis	6 ± 1	0 of 4	0.10	Down
Male accessory glands	36 ± 8	4 of 4	0.70	None
Virgin spermatheca	26 ± 1	1 of 4	0.51	Down
Mated spermatheca	30 ± 4	1 of 4	0.58	Down
Adult carcass	92 ± 6	4 of 4	1.80	Up
Larval CNS	33 ± 4	4 of 4	0.63	Down
Larval Salivary gland	31 ± 6	3 of 4	0.59	Down
Larval midgut	42 ± 6	4 of 4	0.81	None
Larval tubule	1123 ± 95	4 of 4	21.50	Up
Larval hindgut	31 ± 1	4 of 4	0.60	Down
Larval fat body	9 ± 2	0 of 4	0.20	Down
Larval trachea	44 ± 5	4 of 4	0.85	None
Larval carcass	35 ± 3	3 of 4	0.68	Down
S2 cells (growing)	14 ± 0	0 of 4	0.28	Down
Whole fly	52 ± 1	4 of 4

methionine-R-sulfoxide reductase (SelR):

Annotation Number : CG6584
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037847
Gbrowse : chr3R:6689070-6694379 (-) // 100.0 //
Probeset : 1635788_a_at
Accessions : protein= NP_001138036; /// NP_650030; /// NP_731522; /// NP_731523; /// NP_731524; /// NP_731525; /// NP_996195;, nucleotide= NM_001144564; /// NM_141773; /// NM_169368; /// NM_169369; /// NM_169370; /// NM_169371; /// NM_206473;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotatio
Interpro : 0000318 // protein-methionine-R-oxide reductase activity // inferred from direct assay /// 0000318 // protein-methionine
FlyMine data for FBgn0037847.
BDGP gene expression has embryonic in situ data for SelR: 13 pix of staining in 4 body parts.
VDRC has 1 RNAi stocks for FBgn0037847 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	959 ± 19	4 of 4	2.70	Up
Head	538 ± 42	4 of 4	1.50	Up
Eye	797 ± 62	4 of 4	2.26	Up
Thoracicoabdominal ganglion	811 ± 21	4 of 4	2.30	Up
Salivary gland	332 ± 10	4 of 4	0.94	None
Crop	496 ± 12	4 of 4	1.40	Up
Midgut	228 ± 3	4 of 4	0.60	Down
Tubule	1507 ± 115	4 of 4	4.30	Up
Hindgut	453 ± 20	4 of 4	1.30	Up
Heart	423 ± 19	4 of 4	1.20	None
Fat body	335 ± 22	4 of 4	0.95	None
Ovary	304 ± 10	4 of 4	0.90	None
Testis	136 ± 1	4 of 4	0.40	Down
Male accessory glands	230 ± 11	4 of 4	0.70	Down
Virgin spermatheca	236 ± 10	4 of 4	0.67	Down
Mated spermatheca	265 ± 6	4 of 4	0.75	Down
Adult carcass	476 ± 32	4 of 4	1.30	Up
Larval CNS	261 ± 41	4 of 4	0.74	Down
Larval Salivary gland	457 ± 37	4 of 4	1.30	None
Larval midgut	169 ± 18	4 of 4	0.48	Down
Larval tubule	1837 ± 97	4 of 4	5.20	Up
Larval hindgut	273 ± 18	4 of 4	0.77	None
Larval fat body	184 ± 15	4 of 4	0.50	Down
Larval trachea	201 ± 21	4 of 4	0.57	Down
Larval carcass	315 ± 25	4 of 4	0.89	None
S2 cells (growing)	153 ± 6	4 of 4	0.43	Down
Whole fly	353 ± 27	4 of 4

Looking for FBgn0037847. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720