FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037873 through 18771 annotations produced 1 hits

chr3R:7034855-7035571 (-) // 100.0 // (succinate dehydrogenase C):

Annotation Number : CG6666
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1639507_at
Accessions : protein= , nucleotide= NP_650047;
Pathway : "0006099 // tricarboxylic acid cycle // inferred from sequence or structural similarity /// 0006099 // tricarboxylic aci
Interpro : succinate to ubiquinone // inferred from mutant phenotype /// 0006121 // mitochondrial electron transport
FlyMine data for full length.
Homophila reports that CG6666 is a close match (7e-14) to human gene PGL3;SDHC (NP_001030590), a gene associated with Paraganglioma and gastric stromal sarcoma, 606864 (3);Paragangliomas, familial nonchromaffin, 3, 605373 (3).
BioGrid reports that CG6666 interacts with CG7146 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1132 ± 24	4 of 4	0.90	None
Head	1358 ± 30	4 of 4	1.10	None
Eye	1658 ± 56	4 of 4	1.36	Up
Thoracicoabdominal ganglion	1441 ± 33	4 of 4	1.20	Up
Salivary gland	2048 ± 27	4 of 4	1.68	Up
Crop	1305 ± 52	4 of 4	1.10	None
Midgut	1685 ± 13	4 of 4	1.40	Up
Tubule	1874 ± 71	4 of 4	1.50	Up
Hindgut	2184 ± 35	4 of 4	1.80	Up
Heart	1723 ± 44	4 of 4	1.42	Up
Fat body	1314 ± 42	4 of 4	1.08	None
Ovary	441 ± 11	4 of 4	0.40	Down
Testis	263 ± 3	4 of 4	0.20	Down
Male accessory glands	1199 ± 42	4 of 4	1.00	None
Virgin spermatheca	1140 ± 77	4 of 4	0.94	None
Mated spermatheca	1182 ± 88	4 of 4	0.97	None
Adult carcass	2832 ± 139	4 of 4	2.30	Up
Larval CNS	758 ± 48	4 of 4	0.62	Down
Larval Salivary gland	1333 ± 23	4 of 4	1.09	None
Larval midgut	1583 ± 54	4 of 4	1.30	Up
Larval tubule	801 ± 69	4 of 4	0.70	Down
Larval hindgut	1837 ± 68	4 of 4	1.51	Up
Larval fat body	350 ± 24	4 of 4	0.30	Down
Larval trachea	717 ± 41	4 of 4	0.59	Down
Larval carcass	1521 ± 126	4 of 4	1.25	None
S2 cells (growing)	747 ± 18	4 of 4	0.61	Down
Whole fly	1217 ± 62	4 of 4

Looking for FBgn0037873. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720