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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037874 through 18771 annotations produced 1 hits



Translationally controlled tumor protein (Tctp):

Annotation Number : CG4800
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037874
Gbrowse : chr3R:7035974-7037006 (+) // 100.0 //
Probeset : 1637164_at
Accessions : protein= NP_650048;, nucleotide= NM_141791;
Pathway : 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /
Interpro : 0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005509 // calcium ion binding /
FlyMine data for FBgn0037874.
BioGrid reports that CG4800 interacts with CG6998 CG8173 CG8282 CG8884 CG9520 CG9986 .
TRiP has 1 RNAi stocks for FBgn0037874 available for purchase.
VDRC has 3 RNAi stocks for FBgn0037874 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2107 ± 564 of 4 0.70Down
Head3576 ± 1234 of 4 1.20Up
Eye5734 ± 994 of 4 1.85Up
Thoracicoabdominal ganglion2575 ± 594 of 4 0.80Down
Salivary gland6367 ± 2034 of 4 2.06Up
Crop4281 ± 1364 of 4 1.40Up
Midgut3460 ± 574 of 4 1.10None
Tubule4029 ± 694 of 4 1.30Up
Hindgut3753 ± 344 of 4 1.20Up
Heart5037 ± 3654 of 4 1.63Up
Fat body4722 ± 4384 of 4 1.53Up
Ovary2957 ± 494 of 4 1.00None
Testis936 ± 344 of 4 0.30Down
Male accessory glands4810 ± 704 of 4 1.60Up
Virgin spermatheca4832 ± 504 of 4 1.56Up
Mated spermatheca4966 ± 924 of 4 1.61Up
Adult carcass3985 ± 2234 of 4 1.30Up
Larval CNS2184 ± 1334 of 4 0.71Down
Larval Salivary gland4483 ± 1724 of 4 1.45Up
Larval midgut2718 ± 944 of 4 0.88None
Larval tubule3549 ± 494 of 4 1.10Up
Larval hindgut3377 ± 364 of 4 1.09None
Larval fat body5065 ± 5164 of 4 1.60Up
Larval trachea4635 ± 2184 of 4 1.50Up
Larval carcass3407 ± 1724 of 4 1.10None
S2 cells (growing)4056 ± 864 of 4 1.31Up
Whole fly3093 ± 1414 of 4

Looking for FBgn0037874. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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