Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037883 through 18771 annotations produced 1 hits



(CG14701):

Annotation Number : CG14701
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037883
Gbrowse : chr3R:7057738-7058140 (+) // 100.0 //
Probeset : 1627723_at
Accessions : protein= NP_650057;, nucleotide= NM_141800;
Interpro : 0046872 // metal ion binding // inferred from electronic annotation
FlyMine data for FBgn0037883.
VDRC has 1 RNAi stocks for FBgn0037883 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain51 ± 14 of 4 1.10None
Head55 ± 24 of 4 1.20None
Eye49 ± 34 of 4 1.05None
Thoracicoabdominal ganglion48 ± 34 of 4 1.00None
Salivary gland49 ± 40 of 4 1.05None
Crop43 ± 14 of 4 0.90None
Midgut23 ± 30 of 4 0.50Down
Tubule78 ± 54 of 4 1.70Up
Hindgut34 ± 21 of 4 0.70Down
Heart51 ± 34 of 4 1.10None
Fat body59 ± 104 of 4 1.27None
Ovary83 ± 14 of 4 1.80Up
Testis11 ± 20 of 4 0.20Down
Male accessory glands123 ± 64 of 4 2.60Up
Virgin spermatheca36 ± 34 of 4 0.77Down
Mated spermatheca57 ± 24 of 4 1.22Up
Adult carcass41 ± 62 of 4 0.90None
Larval CNS56 ± 34 of 4 1.21Up
Larval Salivary gland88 ± 34 of 4 1.88Up
Larval midgut37 ± 32 of 4 0.79None
Larval tubule41 ± 14 of 4 0.90None
Larval hindgut51 ± 54 of 4 1.09None
Larval fat body25 ± 21 of 4 0.50Down
Larval trachea68 ± 104 of 4 1.46Up
Larval carcass64 ± 121 of 4 1.38None
S2 cells (growing)94 ± 24 of 4 2.01Up
Whole fly46 ± 24 of 4

Looking for FBgn0037883. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime