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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037884 through 18771 annotations produced 1 hits



arfaptin-2 (CG17184):

Annotation Number : CG17184
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037884
Gbrowse : chr3R:7058150-7060907 (-) // 100.0 //
Probeset : 1629848_s_at
Accessions : protein= NP_650058; /// NP_731556;, nucleotide= NM_141801; /// NM_169381;
FlyMine data for FBgn0037884.
VDRC has 2 RNAi stocks for FBgn0037884 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain308 134 of 4 2.10Up
Head129 44 of 4 0.90None
Eye95 24 of 4 0.65Down
Thoracicoabdominal ganglion321 64 of 4 2.20Up
Salivary gland202 124 of 4 1.39Up
Crop176 94 of 4 1.20None
Midgut150 04 of 4 1.00None
Tubule128 54 of 4 0.90Down
Hindgut174 04 of 4 1.20Up
Heart98 64 of 4 0.67Down
Fat body86 74 of 4 0.59Down
Ovary439 124 of 4 3.00Up
Testis178 124 of 4 1.20None
Male accessory glands140 34 of 4 1.00None
Virgin spermatheca137 84 of 4 0.94None
Mated spermatheca167 194 of 4 1.15None
Adult carcass89 54 of 4 0.60Down
Larval CNS402 224 of 4 2.76Up
Larval Salivary gland304 344 of 4 2.08Up
Larval midgut259 24 of 4 1.78Up
Larval tubule122 64 of 4 0.80None
Larval hindgut300 64 of 4 2.05Up
Larval fat body115 124 of 4 0.80None
Larval trachea146 24 of 4 1.00None
Larval carcass294 54 of 4 2.01Up
S2 cells (growing)349 134 of 4 2.39Up
Whole fly146 84 of 4

Looking for FBgn0037884. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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