FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037891 through 18771 annotations produced 1 hits

(CG5214):

Annotation Number : CG5214
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037891
Gbrowse : chr3R:7070005-7072586 (+) // 100.0 //
Probeset : 1639513_at
Accessions : protein= NP_650064;, nucleotide= NM_141807;
Pathway : 0005811 // lipid particle // inferred from direct assay /// 0005875 // microtubule associated complex // inferred from d
Interpro : 0004149 // dihydrolipoyllysine-residue succinyltransferase activity // inferred from sequence or structural similarity /
FlyMine data for FBgn0037891.
BDGP gene expression has embryonic in situ data for CG5214: 4 pix of staining in 1 body parts.
Homophila reports that CG5214 is a close match (1e-20) to human gene (NP_001922), a gene associated with .
BioGrid reports that CG5214 interacts with CG6416 CG7763 .
VDRC has 3 RNAi stocks for FBgn0037891 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	777 ± 12	4 of 4	1.10	Up
Head	811 ± 19	4 of 4	1.20	Up
Eye	1019 ± 42	4 of 4	1.49	Up
Thoracicoabdominal ganglion	985 ± 27	4 of 4	1.40	Up
Salivary gland	1740 ± 29	4 of 4	2.55	Up
Crop	999 ± 25	4 of 4	1.50	Up
Midgut	440 ± 14	4 of 4	0.60	Down
Tubule	1048 ± 47	4 of 4	1.50	Up
Hindgut	1231 ± 31	4 of 4	1.80	Up
Heart	1054 ± 13	4 of 4	1.54	Up
Fat body	854 ± 47	4 of 4	1.25	Up
Ovary	480 ± 28	4 of 4	0.70	Down
Testis	715 ± 23	4 of 4	1.00	None
Male accessory glands	373 ± 11	4 of 4	0.50	Down
Virgin spermatheca	1065 ± 29	4 of 4	1.56	Up
Mated spermatheca	965 ± 60	4 of 4	1.41	Up
Adult carcass	1712 ± 78	4 of 4	2.50	Up
Larval CNS	539 ± 33	4 of 4	0.79	Down
Larval Salivary gland	669 ± 31	4 of 4	0.98	None
Larval midgut	710 ± 49	4 of 4	1.04	None
Larval tubule	422 ± 34	4 of 4	0.60	Down
Larval hindgut	1419 ± 60	4 of 4	2.08	Up
Larval fat body	267 ± 23	4 of 4	0.40	Down
Larval trachea	490 ± 27	4 of 4	0.72	Down
Larval carcass	1267 ± 139	4 of 4	1.86	Up
S2 cells (growing)	305 ± 6	4 of 4	0.45	Down
Whole fly	682 ± 20	4 of 4

Looking for FBgn0037891. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720