FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037913 through 18771 annotations produced 2 hits

/// scheggia (CG6783 /// sea):

Annotation Number : CG31305
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037912 /// FBgn0037913
Gbrowse : chr3R:7385611-7392771 (-) // 100.0 //
Probeset : 1623518_s_at
Accessions : protein= NP_001027175; /// NP_001027176; /// NP_001027177; /// NP_001027178; /// NP_001027179; /// NP_001027180; /// NP_001027181;, nucleotide= NM_001032004; /// NM_001032005; /// NM_001032006; /// NM_001032007; /// NM_001032008; /// NM_001032009; /// NM_001032010;
Pathway : 0005739 // mitochondrion // inferred from direct assay /// 0005740 // mitochondrial envelope // inferred from sequence o
Interpro : 0005215 // transporter activity // inferred from electronic annotation /// 0005371 // tricarboxylate secondary active tr
FlyMine data for FBgn0037912 /// FBgn0037913.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	495 ± 13	4 of 4	0.70	Down
Head	913 ± 33	4 of 4	1.20	Up
Eye	954 ± 28	4 of 4	1.28	Up
Thoracicoabdominal ganglion	584 ± 6	4 of 4	0.80	Down
Salivary gland	1637 ± 62	4 of 4	2.20	Up
Crop	1108 ± 8	4 of 4	1.50	Up
Midgut	1714 ± 34	4 of 4	2.30	Up
Tubule	617 ± 90	4 of 4	0.80	None
Hindgut	1208 ± 17	4 of 4	1.60	Up
Heart	2103 ± 85	4 of 4	2.83	Up
Fat body	2481 ± 164	4 of 4	3.34	Up
Ovary	502 ± 12	4 of 4	0.70	Down
Testis	195 ± 10	4 of 4	0.30	Down
Male accessory glands	188 ± 9	4 of 4	0.30	Down
Virgin spermatheca	3431 ± 125	4 of 4	4.62	Up
Mated spermatheca	3479 ± 183	4 of 4	4.68	Up
Adult carcass	1772 ± 64	4 of 4	2.40	Up
Larval CNS	432 ± 38	4 of 4	0.58	Down
Larval Salivary gland	412 ± 18	4 of 4	0.55	Down
Larval midgut	1421 ± 88	4 of 4	1.91	Up
Larval tubule	130 ± 7	4 of 4	0.20	Down
Larval hindgut	961 ± 46	4 of 4	1.29	Up
Larval fat body	401 ± 42	4 of 4	0.50	Down
Larval trachea	932 ± 38	4 of 4	1.25	Up
Larval carcass	869 ± 66	4 of 4	1.17	None
S2 cells (growing)	384 ± 3	4 of 4	0.52	Down
Whole fly	743 ± 26	4 of 4

(CG6783):

Annotation Number : CG31305
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037913
Gbrowse : chr3R:7389783-7392771 (-) // 100.0 //
Probeset : 1627014_a_at
Accessions : protein= NP_001027179; /// NP_001027180; /// NP_001027181;, nucleotide= NM_001032008; /// NM_001032009; /// NM_001032010;
Pathway : 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from elec
Interpro : 0005215 // transporter activity // inferred from electronic annotation /// 0005488 // binding // inferred from electroni
FlyMine data for FBgn0037913.
TRiP has 2 RNAi stocks for FBgn0037913 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2360 ± 60	4 of 4	0.60	Down
Head	4546 ± 215	4 of 4	1.20	Up
Eye	8120 ± 193	4 of 4	2.19	Up
Thoracicoabdominal ganglion	2944 ± 76	4 of 4	0.80	Down
Salivary gland	113 ± 7	4 of 4	0.03	Down
Crop	6502 ± 396	4 of 4	1.80	Up
Midgut	5971 ± 198	4 of 4	1.60	Up
Tubule	3212 ± 378	4 of 4	0.90	None
Hindgut	5282 ± 167	4 of 4	1.40	Up
Heart	5612 ± 188	4 of 4	1.51	Up
Fat body	5626 ± 415	4 of 4	1.52	Up
Ovary	3554 ± 65	4 of 4	1.00	None
Testis	1150 ± 32	4 of 4	0.30	Down
Male accessory glands	326 ± 34	4 of 4	0.10	Down
Virgin spermatheca	5146 ± 42	4 of 4	1.39	Up
Mated spermatheca	4239 ± 339	4 of 4	1.14	None
Adult carcass	5289 ± 200	4 of 4	1.40	Up
Larval CNS	3400 ± 301	4 of 4	0.92	None
Larval Salivary gland	5215 ± 216	4 of 4	1.41	Up
Larval midgut	7149 ± 249	4 of 4	1.93	Up
Larval tubule	3252 ± 190	4 of 4	0.90	None
Larval hindgut	4122 ± 191	4 of 4	1.11	None
Larval fat body	9514 ± 1125	4 of 4	2.60	Up
Larval trachea	4654 ± 332	4 of 4	1.25	Up
Larval carcass	2679 ± 195	4 of 4	0.72	Down
S2 cells (growing)	3545 ± 26	4 of 4	0.96	None
Whole fly	3710 ± 249	4 of 4

Looking for FBgn0037913. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720