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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037943 through 18771 annotations produced 1 hits



(CG14722):

Annotation Number : CG14722
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037943
Gbrowse : chr3R:7567583-7569762 (+) // 100.0 //
Probeset : 1627788_at
Accessions : protein= NP_650111;, nucleotide= NM_141854;
Interpro : 0016505 // apoptotic protease activator activity // inferred from sequence or structural similarity
FlyMine data for FBgn0037943.
BDGP gene expression has embryonic in situ data for CG14722: 15 pix of staining in 14 body parts.
BioGrid reports that CG14722 interacts with CG17957 .
VDRC has 2 RNAi stocks for FBgn0037943 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain116 ± 34 of 4 1.10None
Head80 ± 14 of 4 0.70None
Eye101 ± 54 of 4 0.95None
Thoracicoabdominal ganglion100 ± 34 of 4 0.90None
Salivary gland199 ± 44 of 4 1.85Up
Crop102 ± 14 of 4 0.90None
Midgut81 ± 44 of 4 0.80None
Tubule97 ± 54 of 4 0.90None
Hindgut68 ± 24 of 4 0.60Down
Heart86 ± 34 of 4 0.81None
Fat body100 ± 44 of 4 0.93None
Ovary151 ± 94 of 4 1.40Up
Testis94 ± 34 of 4 0.90None
Male accessory glands288 ± 54 of 4 2.70Up
Virgin spermatheca74 ± 44 of 4 0.70None
Mated spermatheca82 ± 64 of 4 0.76None
Adult carcass83 ± 84 of 4 0.80None
Larval CNS157 ± 154 of 4 1.46Up
Larval Salivary gland145 ± 74 of 4 1.35Up
Larval midgut60 ± 14 of 4 0.56Down
Larval tubule65 ± 54 of 4 0.60Down
Larval hindgut81 ± 14 of 4 0.76None
Larval fat body62 ± 54 of 4 0.60Down
Larval trachea101 ± 154 of 4 0.95None
Larval carcass96 ± 84 of 4 0.90None
S2 cells (growing)148 ± 114 of 4 1.38None
Whole fly107 ± 124 of 4

Looking for FBgn0037943. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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