FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037975 through 18771 annotations produced 1 hits

(CG3397):

Annotation Number : CG3397
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037975
Gbrowse : chr3R:7808807-7810263 (-) // 100.0 //
Probeset : 1631805_at
Accessions : protein= NP_650140;, nucleotide= NM_141883;
Pathway : 0008076 // voltage-gated potassium channel complex // inferred from sequence or structural similarity
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from
FlyMine data for FBgn0037975.
BDGP gene expression has embryonic in situ data for CG3397: 8 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0037975 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	8 ± 1	3 of 4	0.20	Down
Head	181 ± 9	4 of 4	3.40	Up
Eye	56 ± 7	4 of 4	1.04	None
Thoracicoabdominal ganglion	8 ± 1	2 of 4	0.20	Down
Salivary gland	7 ± 3	0 of 4	0.15	Down
Crop	8 ± 2	1 of 4	0.20	Down
Midgut	20 ± 2	4 of 4	0.40	Down
Tubule	9 ± 1	1 of 4	0.20	Down
Hindgut	20 ± 1	4 of 4	0.40	Down
Heart	194 ± 17	4 of 4	3.58	Up
Fat body	534 ± 28	4 of 4	9.85	Up
Ovary	10 ± 2	4 of 4	0.20	Down
Testis	40 ± 2	4 of 4	0.80	None
Male accessory glands	3 ± 1	0 of 4	0.10	Down
Virgin spermatheca	592 ± 9	4 of 4	10.91	Up
Mated spermatheca	472 ± 26	4 of 4	8.71	Up
Adult carcass	215 ± 13	4 of 4	4.00	Up
Larval CNS	5 ± 0	0 of 4	0.10	Down
Larval Salivary gland	14 ± 0	4 of 4	0.26	Down
Larval midgut	10 ± 3	0 of 4	0.20	Down
Larval tubule	7 ± 0	0 of 4	0.10	Down
Larval hindgut	13 ± 3	4 of 4	0.26	Down
Larval fat body	2592 ± 271	4 of 4	47.80	Up
Larval trachea	8 ± 3	2 of 4	0.16	Down
Larval carcass	5 ± 2	0 of 4	0.09	Down
S2 cells (growing)	15 ± 1	4 of 4	0.29	Down
Whole fly	54 ± 5	4 of 4

Looking for FBgn0037975. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720