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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: 16/4/2014: We have just migrated to a new server (the old one ran XP!).
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037985 through 18771 annotations produced 1 hits



CG14735 (ssp5):

Annotation Number : CG14735
Flybase ID : FBgn0037985
Gbrowse : chr3R:7858863-7861249 (+) // 100.0 //
Probeset : 1631324_at
Accessions : protein= NP_650149;, nucleotide= NM_141892;
FlyMine data for FBgn0037985.
BDGP gene expression has embryonic in situ data for CG14735: 4 pix of staining in 1 body parts.
BioGrid reports that CG14735 interacts with CG3953 .
VDRC has 2 RNAi stocks for FBgn0037985 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 10 of 4 0.00Down
Head5 20 of 4 0.00Down
Eye4 10 of 4 0.02Down
Thoracicoabdominal ganglion4 10 of 4 0.00Down
Salivary gland4 10 of 4 0.02Down
Crop1 00 of 4 0.00Down
Midgut2 00 of 4 0.00Down
Tubule2 10 of 4 0.00Down
Hindgut5 00 of 4 0.00Down
Heart2 00 of 4 0.01Down
Fat body4 20 of 4 0.02Down
Ovary0 00 of 4 0.00Down
Testis1749 644 of 4 9.70Up
Male accessory glands4 10 of 4 0.00Down
Virgin spermatheca2 10 of 4 0.01Down
Mated spermatheca4 10 of 4 0.02Down
Adult carcass10 30 of 4 0.10Down
Larval CNS3 00 of 4 0.02Down
Larval Salivary gland6 20 of 4 0.03Down
Larval midgut4 10 of 4 0.02Down
Larval tubule6 20 of 4 0.00Down
Larval hindgut1 00 of 4 0.01Down
Larval fat body171 943 of 4 1.00None
Larval trachea5 81 of 4 0.03Down
Larval carcass4 10 of 4 0.03Down
S2 cells (growing)1 00 of 4 0.01Down
Whole fly179 134 of 4

Looking for FBgn0037985. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime