Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037989 through 18771 annotations produced 1 hits



(CG14741):

Annotation Number : CG14741
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037989
Gbrowse : chr3R:7895304-7903198 (-) // 100.0 //
Probeset : 1638859_at
Accessions : protein= NP_731669;, nucleotide= NM_169450;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred f
FlyMine data for FBgn0037989.
Homophila reports that CG14741 is a close match (8e-12) to human gene ATP2B2;PMCA2 (NP_001674), a gene associated with Deafness, autosomal recessive 12, modifier of, 601386 (3).
VDRC has 1 RNAi stocks for FBgn0037989 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain39 ± 24 of 4 4.10Up
Head16 ± 42 of 4 1.70None
Eye6 ± 00 of 4 0.65None
Thoracicoabdominal ganglion40 ± 44 of 4 4.10Up
Salivary gland24 ± 40 of 4 2.52Up
Crop11 ± 10 of 4 1.10None
Midgut20 ± 20 of 4 2.10Up
Tubule12 ± 10 of 4 1.30None
Hindgut18 ± 10 of 4 1.90Up
Heart4 ± 10 of 4 0.47None
Fat body8 ± 60 of 4 0.85None
Ovary2 ± 00 of 4 0.20Down
Testis20 ± 21 of 4 2.10Up
Male accessory glands9 ± 10 of 4 1.00None
Virgin spermatheca6 ± 20 of 4 0.63None
Mated spermatheca8 ± 20 of 4 0.83None
Adult carcass14 ± 40 of 4 1.50None
Larval CNS13 ± 10 of 4 1.41None
Larval Salivary gland2 ± 00 of 4 0.28Down
Larval midgut13 ± 30 of 4 1.39None
Larval tubule16 ± 21 of 4 1.70None
Larval hindgut13 ± 10 of 4 1.34None
Larval fat body9 ± 10 of 4 1.00None
Larval trachea3 ± 10 of 4 0.40None
Larval carcass6 ± 20 of 4 0.64None
S2 cells (growing)563 ± 114 of 457.97Up
Whole fly9 ± 20 of 4

Looking for FBgn0037989. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime