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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037993 through 18771 annotations produced 1 hits



dpr15 (dpr15):

Annotation Number : CG10095
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037993
Gbrowse : chr3R:7964554-7984317 (-) // 100.0 //
Probeset : 1636199_at
Accessions : protein= NP_731672;, nucleotide= NM_169453;
FlyMine data for FBgn0037993.
BDGP gene expression has embryonic in situ data for CG10095: 4 pix of staining in 1 body parts.
VDRC has 4 RNAi stocks for FBgn0037993 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain196 ± 34 of 430.10Up
Head31 ± 24 of 4 4.80Up
Eye5 ± 00 of 4 0.83None
Thoracicoabdominal ganglion215 ± 24 of 433.00Up
Salivary gland7 ± 30 of 4 1.13None
Crop4 ± 10 of 4 0.70None
Midgut1 ± 00 of 4 0.20Down
Tubule1 ± 00 of 4 0.30Down
Hindgut3 ± 10 of 4 0.50None
Heart1 ± 00 of 4 0.21Down
Fat body6 ± 21 of 4 0.95None
Ovary1 ± 00 of 4 0.20Down
Testis4 ± 01 of 4 0.60None
Male accessory glands5 ± 20 of 4 0.90None
Virgin spermatheca1 ± 00 of 4 0.27Down
Mated spermatheca2 ± 10 of 4 0.45None
Adult carcass0 ± 00 of 4 0.10Down
Larval CNS74 ± 64 of 411.42Up
Larval Salivary gland3 ± 10 of 4 0.46None
Larval midgut3 ± 10 of 4 0.46None
Larval tubule3 ± 10 of 4 0.50None
Larval hindgut1 ± 00 of 4 0.27Down
Larval fat body2 ± 10 of 4 0.30Down
Larval trachea1 ± 00 of 4 0.19Down
Larval carcass1 ± 00 of 4 0.25Down
S2 cells (growing)2 ± 00 of 4 0.31Down
Whole fly6 ± 11 of 4

Looking for FBgn0037993. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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