FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038037 through 18771 annotations produced 1 hits

Cyp9f2 (Cyp9f2):

Annotation Number : CG11466
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038037
Gbrowse : chr3R:8229056-8231809 (-) // 100.0 //
Probeset : 1639944_at
Accessions : protein= NP_650189; /// NP_996200;, nucleotide= NM_141932; /// NM_206478;
Pathway : 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane //
Interpro : 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred fro
FlyMine data for FBgn0038037.
BDGP gene expression has embryonic in situ data for Cyp9f2: 11 pix of staining in 3 body parts.
Homophila reports that CG11466 is a close match (3e-11) to human gene (NP_000764), a gene associated with .
BioGrid reports that CG11466 interacts with CG11796 CG11804 CG12352 CG12768 CG13956 CG1430 CG14325 CG15382 CG3428 CG4918 CG6283 CG6565 CG6846 CG7017 CG7111 CG9091 CG9181 CG9752 CG31359 CG18743 CG31449 CG5834 CG6489 CG31366 Dmel CG33957 .
VDRC has 3 RNAi stocks for FBgn0038037 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	918 ± 10	4 of 4	2.20	Up
Head	1219 ± 27	4 of 4	2.90	Up
Eye	1475 ± 29	4 of 4	3.46	Up
Thoracicoabdominal ganglion	1091 ± 29	4 of 4	2.60	Up
Salivary gland	735 ± 24	4 of 4	1.73	Up
Crop	2486 ± 75	4 of 4	5.80	Up
Midgut	2781 ± 42	4 of 4	6.50	Up
Tubule	2811 ± 129	4 of 4	6.60	Up
Hindgut	1836 ± 34	4 of 4	4.30	Up
Heart	823 ± 29	4 of 4	1.93	Up
Fat body	727 ± 106	4 of 4	1.71	Up
Ovary	38 ± 1	4 of 4	0.10	Down
Testis	39 ± 3	4 of 4	0.10	Down
Male accessory glands	129 ± 6	4 of 4	0.30	Down
Virgin spermatheca	711 ± 12	4 of 4	1.67	Up
Mated spermatheca	581 ± 61	4 of 4	1.36	None
Adult carcass	871 ± 55	4 of 4	2.00	Up
Larval CNS	378 ± 70	4 of 4	0.89	None
Larval Salivary gland	26 ± 4	4 of 4	0.06	Down
Larval midgut	3429 ± 278	4 of 4	8.05	Up
Larval tubule	949 ± 38	4 of 4	2.20	Up
Larval hindgut	743 ± 75	4 of 4	1.74	Up
Larval fat body	450 ± 63	4 of 4	1.10	None
Larval trachea	702 ± 218	4 of 4	1.65	None
Larval carcass	136 ± 5	4 of 4	0.32	Down
S2 cells (growing)	507 ± 7	4 of 4	1.19	None
Whole fly	426 ± 50	4 of 4

Looking for FBgn0038037. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720