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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0038045 through 18771 annotations produced 1 hits



N-acetylneuraminic acid phosphate synthase (Sas):

Annotation Number : CG5232
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038045
Gbrowse : chr3R:8252299-8253599 (+) // 100.0 //
Probeset : 1639936_at
Accessions : protein= NP_650195;, nucleotide= NM_141938;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0047444 // N-acylneuraminate-9-phosphate syntha
FlyMine data for FBgn0038045.
BioGrid reports that CG5232 interacts with CG6779 .
TRiP has 1 RNAi stocks for FBgn0038045 available for purchase.
VDRC has 3 RNAi stocks for FBgn0038045 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain40 ± 14 of 4 7.70Up
Head10 ± 30 of 4 2.10None
Eye4 ± 10 of 4 0.89None
Thoracicoabdominal ganglion59 ± 34 of 411.20Up
Salivary gland6 ± 10 of 4 1.17None
Crop4 ± 10 of 4 0.80None
Midgut3 ± 10 of 4 0.70None
Tubule2 ± 00 of 4 0.50Down
Hindgut5 ± 10 of 4 1.10None
Heart3 ± 20 of 4 0.58None
Fat body4 ± 40 of 4 0.93None
Ovary2 ± 10 of 4 0.40None
Testis6 ± 00 of 4 1.20None
Male accessory glands9 ± 20 of 4 1.70None
Virgin spermatheca3 ± 10 of 4 0.60None
Mated spermatheca2 ± 10 of 4 0.52None
Adult carcass2 ± 00 of 4 0.50None
Larval CNS84 ± 14 of 415.90Up
Larval Salivary gland8 ± 10 of 4 1.57None
Larval midgut5 ± 10 of 4 1.01None
Larval tubule4 ± 10 of 4 0.90None
Larval hindgut3 ± 00 of 4 0.58None
Larval fat body2 ± 00 of 4 0.50None
Larval trachea4 ± 10 of 4 0.88None
Larval carcass3 ± 00 of 4 0.68None
S2 cells (growing)5 ± 10 of 4 1.05None
Whole fly5 ± 20 of 4

Looking for FBgn0038045. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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