FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038063 through 18771 annotations produced 2 hits

Octbeta2R (Octbeta2R):

Annotation Number : CG6989
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038063
Gbrowse : chr3R:8378365-8380608 (-) // 100.0 //
Probeset : 1633087_at
Accessions : protein= NP_001034049; /// NP_001163596;, nucleotide= NM_001038960; /// NM_001170125;
Pathway : DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic ann
Interpro : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
FlyMine data for FBgn0038063.
BDGP gene expression has embryonic in situ data for CG6989: 4 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0038063 available for purchase.
VDRC has 4 RNAi stocks for FBgn0038063 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 0	0 of 4	1.20	None
Head	5 ± 1	0 of 4	1.00	None
Eye	4 ± 1	0 of 4	0.94	None
Thoracicoabdominal ganglion	2 ± 1	0 of 4	0.60	None
Salivary gland	2 ± 0	0 of 4	0.45	None
Crop	7 ± 1	0 of 4	1.40	None
Midgut	1 ± 0	0 of 4	0.20	None
Tubule	2 ± 0	0 of 4	0.50	Down
Hindgut	5 ± 0	0 of 4	1.10	None
Heart	2 ± 0	0 of 4	0.48	None
Fat body	1 ± 0	0 of 4	0.20	None
Ovary	1 ± 0	0 of 4	0.20	None
Testis	9 ± 2	2 of 4	1.80	None
Male accessory glands	4 ± 2	0 of 4	0.80	None
Virgin spermatheca	3 ± 0	0 of 4	0.58	None
Mated spermatheca	4 ± 1	0 of 4	0.90	None
Adult carcass	4 ± 0	0 of 4	0.80	None
Larval CNS	0 ± 0	0 of 4	0.11	None
Larval Salivary gland	1 ± 0	0 of 4	0.22	None
Larval midgut	0 ± 0	0 of 4	0.18	None
Larval tubule	2 ± 1	0 of 4	0.60	None
Larval hindgut	4 ± 1	0 of 4	0.82	None
Larval fat body	3 ± 2	0 of 4	0.80	None
Larval trachea	2 ± 1	0 of 4	0.50	None
Larval carcass	30 ± 4	3 of 4	6.04	Up
S2 cells (growing)	2 ± 0	0 of 4	0.46	None
Whole fly	5 ± 2	0 of 4

Octbeta2R (Octbeta2R):

Annotation Number : CG18553
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038063
Gbrowse : chr3R:8385773-8386676 (-) // 100.0 //
Probeset : 1641186_at
Accessions : protein= NP_001034049; /// NP_001163596;, nucleotide= NM_001038960; /// NM_001170125;
Pathway : DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic ann
Interpro : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
FlyMine data for FBgn0038063.
BDGP gene expression has embryonic in situ data for CG6989: 4 pix of staining in 1 body parts.
Homophila reports that CG18553 is a close match (9e-11) to human gene CBBM;CBP;OPN1LW;RCP (NP_064445), a gene associated with Blue-cone monochromacy, 303700 (3);Colorblindness, protan (3).
TRiP has 1 RNAi stocks for FBgn0038063 available for purchase.
VDRC has 4 RNAi stocks for FBgn0038063 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	21 ± 1	4 of 4	4.30	Up
Head	9 ± 0	1 of 4	1.90	None
Eye	8 ± 2	2 of 4	1.60	None
Thoracicoabdominal ganglion	15 ± 3	3 of 4	3.00	Up
Salivary gland	12 ± 2	1 of 4	2.36	None
Crop	19 ± 2	4 of 4	3.70	Up
Midgut	5 ± 1	0 of 4	1.10	None
Tubule	3 ± 0	0 of 4	0.80	Down
Hindgut	5 ± 2	0 of 4	1.00	None
Heart	5 ± 1	0 of 4	1.12	None
Fat body	6 ± 2	0 of 4	1.36	None
Ovary	5 ± 0	1 of 4	1.20	None
Testis	5 ± 0	1 of 4	1.00	None
Male accessory glands	12 ± 2	0 of 4	2.30	None
Virgin spermatheca	7 ± 2	0 of 4	1.51	None
Mated spermatheca	5 ± 0	0 of 4	1.15	None
Adult carcass	16 ± 1	1 of 4	3.10	Up
Larval CNS	7 ± 1	4 of 4	1.54	None
Larval Salivary gland	10 ± 2	1 of 4	1.96	None
Larval midgut	3 ± 0	0 of 4	0.74	None
Larval tubule	2 ± 0	0 of 4	0.50	None
Larval hindgut	3 ± 0	0 of 4	0.65	None
Larval fat body	5 ± 2	0 of 4	1.10	None
Larval trachea	7 ± 3	1 of 4	1.53	None
Larval carcass	22 ± 1	4 of 4	4.36	Up
S2 cells (growing)	7 ± 1	1 of 4	1.49	None
Whole fly	5 ± 2	0 of 4

Looking for FBgn0038063. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720