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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0038092 through 18771 annotations produced 1 hits



beat-Vb (beat-Vb):

Annotation Number : CG31298
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038092
Gbrowse : chr3R:8741843-8760535 (+) // 100.0 //
Probeset : 1636074_at
Accessions : protein= NP_731748;, nucleotide= NM_169481;
Pathway : 0005576 // extracellular region // non-traceable author statement
FlyMine data for FBgn0038092.
TRiP has 1 RNAi stocks for FBgn0038092 available for purchase.
VDRC has 3 RNAi stocks for FBgn0038092 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain243 ± 54 of 423.70Up
Head49 ± 34 of 4 4.80Up
Eye8 ± 13 of 4 0.80None
Thoracicoabdominal ganglion222 ± 44 of 421.70Up
Salivary gland12 ± 42 of 4 1.24None
Crop6 ± 03 of 4 0.70Down
Midgut7 ± 10 of 4 0.70None
Tubule4 ± 00 of 4 0.50Down
Hindgut7 ± 13 of 4 0.70None
Heart2 ± 10 of 4 0.20Down
Fat body4 ± 31 of 4 0.40Down
Ovary3 ± 01 of 4 0.30Down
Testis18 ± 04 of 4 1.80Up
Male accessory glands6 ± 20 of 4 0.60None
Virgin spermatheca9 ± 02 of 4 0.87None
Mated spermatheca7 ± 10 of 4 0.74None
Adult carcass3 ± 10 of 4 0.40Down
Larval CNS91 ± 24 of 4 8.89Up
Larval Salivary gland6 ± 11 of 4 0.58None
Larval midgut11 ± 12 of 4 1.12None
Larval tubule4 ± 00 of 4 0.40Down
Larval hindgut6 ± 02 of 4 0.63Down
Larval fat body8 ± 20 of 4 0.80None
Larval trachea4 ± 31 of 4 0.48Down
Larval carcass10 ± 11 of 4 0.98None
S2 cells (growing)8 ± 02 of 4 0.85None
Whole fly10 ± 13 of 4

Looking for FBgn0038092. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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