Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0038111 through 18771 annotations produced 1 hits



(CG12360):

Annotation Number : CG12360
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038111
Gbrowse : chr3R:8852746-8856372 (-) // 100.0 //
Probeset : 1636280_s_at
Accessions : protein= NP_001097765; /// NP_650253; /// NP_731765;, nucleotide= NM_001104295; /// NM_141996; /// NM_169493;
FlyMine data for FBgn0038111.
BDGP gene expression has embryonic in situ data for CG12360: 13 pix of staining in 17 body parts.
BioGrid reports that CG12360 interacts with CG12470 .
TRiP has 1 RNAi stocks for FBgn0038111 available for purchase.
VDRC has 2 RNAi stocks for FBgn0038111 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain204 ± 34 of 4 0.80Down
Head121 ± 144 of 4 0.50Down
Eye151 ± 44 of 4 0.59Down
Thoracicoabdominal ganglion120 ± 114 of 4 0.50Down
Salivary gland555 ± 234 of 4 2.14Up
Crop133 ± 74 of 4 0.50Down
Midgut193 ± 44 of 4 0.70Down
Tubule376 ± 274 of 4 1.50Up
Hindgut105 ± 44 of 4 0.40Down
Heart104 ± 24 of 4 0.40Down
Fat body121 ± 144 of 4 0.47Down
Ovary355 ± 144 of 4 1.40Up
Testis1148 ± 184 of 4 4.40Up
Male accessory glands165 ± 124 of 4 0.60Down
Virgin spermatheca64 ± 34 of 4 0.25Down
Mated spermatheca103 ± 84 of 4 0.40Down
Adult carcass109 ± 34 of 4 0.40Down
Larval CNS173 ± 94 of 4 0.67Down
Larval Salivary gland666 ± 584 of 4 2.57Up
Larval midgut203 ± 134 of 4 0.78Down
Larval tubule659 ± 44 of 4 2.50Up
Larval hindgut136 ± 44 of 4 0.53Down
Larval fat body419 ± 744 of 4 1.60None
Larval trachea126 ± 104 of 4 0.49Down
Larval carcass105 ± 54 of 4 0.41Down
S2 cells (growing)698 ± 54 of 4 2.70Up
Whole fly259 ± 94 of 4

Looking for FBgn0038111. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime