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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0038133 through 18771 annotations produced 1 hits



Osiris (Osi22):

Annotation Number : CG8644
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038133
Gbrowse : chr3R:9116437-9117568 (+) // 100.0 //
Probeset : 1638261_at
Accessions : protein= NP_731783;, nucleotide= NM_169501;
FlyMine data for FBgn0038133.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 00 of 4 0.80None
Head7 ± 11 of 4 1.50None
Eye10 ± 23 of 4 1.99None
Thoracicoabdominal ganglion6 ± 11 of 4 1.20None
Salivary gland7 ± 30 of 4 1.39None
Crop3 ± 10 of 4 0.70None
Midgut8 ± 12 of 4 1.70Up
Tubule7 ± 01 of 4 1.40Up
Hindgut6 ± 02 of 4 1.30None
Heart2 ± 01 of 4 0.55None
Fat body5 ± 10 of 4 0.99None
Ovary4 ± 01 of 4 0.80None
Testis2 ± 00 of 4 0.50None
Male accessory glands8 ± 10 of 4 1.60None
Virgin spermatheca6 ± 00 of 4 1.15None
Mated spermatheca6 ± 11 of 4 1.28None
Adult carcass7 ± 11 of 4 1.40None
Larval CNS4 ± 12 of 4 0.93None
Larval Salivary gland6 ± 01 of 4 1.29None
Larval midgut6 ± 11 of 4 1.21None
Larval tubule3 ± 00 of 4 0.60None
Larval hindgut6 ± 02 of 4 1.18None
Larval fat body7 ± 00 of 4 1.50None
Larval trachea4 ± 21 of 4 0.95None
Larval carcass6 ± 12 of 4 1.26None
S2 cells (growing)4 ± 13 of 4 0.89None
Whole fly5 ± 00 of 4

Looking for FBgn0038133. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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