Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0038157 through 18771 annotations produced 1 hits



(CG12538):

Annotation Number : CG12538
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038157
Gbrowse : chr3R:9348672-9349257 (-) // 100.0 //
Probeset : 1638160_at
Accessions : protein= NP_650293;, nucleotide= NM_142036;
Interpro : 0003993 // acid phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferre
FlyMine data for FBgn0038157.
VDRC has 3 RNAi stocks for FBgn0038157 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.50None
Head0 00 of 4 0.30None
Eye1 00 of 4 0.41None
Thoracicoabdominal ganglion1 00 of 4 0.50None
Salivary gland9 70 of 4 3.60None
Crop3 10 of 4 1.30None
Midgut0 00 of 4 0.30None
Tubule1 00 of 4 0.70Down
Hindgut1 00 of 4 0.60None
Heart0 00 of 4 0.23None
Fat body1 00 of 4 0.36None
Ovary1 00 of 4 0.50None
Testis3 10 of 4 1.50None
Male accessory glands5 20 of 4 2.20None
Virgin spermatheca1 00 of 4 0.46None
Mated spermatheca0 00 of 4 0.30None
Adult carcass2 00 of 4 1.10None
Larval CNS0 00 of 4 0.17None
Larval Salivary gland1 00 of 4 0.53None
Larval midgut1 00 of 4 0.68None
Larval tubule1 00 of 4 0.50None
Larval hindgut0 00 of 4 0.33None
Larval fat body3 10 of 4 1.20None
Larval trachea0 00 of 4 0.25None
Larval carcass5 10 of 4 2.15None
S2 cells (growing)0 00 of 4 0.27None
Whole fly2 00 of 4

Looking for FBgn0038157. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime