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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0038173 through 18771 annotations produced 1 hits



Adenosine deaminase-related growth factor C (Adgf-C):

Annotation Number : CG9345
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038173
Gbrowse : chr3R:9532478-9534854 (+) // 100.0 //
Probeset : 1634216_at
Accessions : protein= NP_650308;, nucleotide= NM_142051;
Pathway : 0005576 // extracellular region // inferred from sequence or structural similarity /// 0005615 // extracellular space //
Interpro : 0004000 // adenosine deaminase activity // non-traceable author statement /// 0004000 // adenosine deaminase activity //
FlyMine data for FBgn0038173.
VDRC has 1 RNAi stocks for FBgn0038173 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain78 14 of 4 3.60Up
Head76 74 of 4 3.50Up
Eye14 24 of 4 0.68None
Thoracicoabdominal ganglion61 24 of 4 2.80Up
Salivary gland31 80 of 4 1.44None
Crop14 10 of 4 0.70Down
Midgut11 10 of 4 0.50Down
Tubule18 31 of 4 0.80None
Hindgut65 24 of 4 3.00Up
Heart15 13 of 4 0.72None
Fat body21 42 of 4 0.97None
Ovary0 00 of 4 0.00Down
Testis8 21 of 4 0.40Down
Male accessory glands22 41 of 4 1.00None
Virgin spermatheca20 14 of 4 0.91None
Mated spermatheca19 24 of 4 0.90None
Adult carcass38 44 of 4 1.70Up
Larval CNS20 24 of 4 0.94None
Larval Salivary gland2 10 of 4 0.13Down
Larval midgut29 34 of 4 1.34None
Larval tubule1 00 of 4 0.10Down
Larval hindgut14 20 of 4 0.64Down
Larval fat body3 10 of 4 0.20Down
Larval trachea164 484 of 4 7.51Up
Larval carcass25 41 of 4 1.18None
S2 cells (growing)2 10 of 4 0.11Down
Whole fly21 24 of 4

Looking for FBgn0038173. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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