FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038198 through 18771 annotations produced 1 hits

CG3153 (Npc2b):

Annotation Number : CG3153
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038198
Gbrowse : chr3R:9915244-9918149 (+) // 100.0 //
Probeset : 1641065_s_at
Accessions : protein= NP_650331; /// NP_731880;, nucleotide= NM_142074; /// NM_169568;
FlyMine data for FBgn0038198.
BDGP gene expression has embryonic in situ data for CG3153: 18 pix of staining in 8 body parts.
TRiP has 1 RNAi stocks for FBgn0038198 available for purchase.
VDRC has 3 RNAi stocks for FBgn0038198 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	146 ± 5	4 of 4	0.50	Down
Head	1314 ± 85	4 of 4	4.50	Up
Eye	343 ± 16	4 of 4	1.18	Up
Thoracicoabdominal ganglion	184 ± 7	4 of 4	0.60	Down
Salivary gland	107 ± 10	4 of 4	0.37	Down
Crop	2454 ± 99	4 of 4	8.40	Up
Midgut	92 ± 3	4 of 4	0.30	Down
Tubule	37 ± 1	4 of 4	0.10	Down
Hindgut	3086 ± 87	4 of 4	10.60	Up
Heart	111 ± 9	4 of 4	0.38	Down
Fat body	132 ± 35	4 of 4	0.45	Down
Ovary	8 ± 1	4 of 4	0.00	Down
Testis	50 ± 0	4 of 4	0.20	Down
Male accessory glands	763 ± 205	4 of 4	2.60	None
Virgin spermatheca	73 ± 3	4 of 4	0.25	Down
Mated spermatheca	76 ± 8	4 of 4	0.26	Down
Adult carcass	864 ± 40	4 of 4	3.00	Up
Larval CNS	99 ± 9	4 of 4	0.34	Down
Larval Salivary gland	6 ± 1	0 of 4	0.02	Down
Larval midgut	51 ± 2	4 of 4	0.17	Down
Larval tubule	13 ± 2	4 of 4	0.00	Down
Larval hindgut	742 ± 37	4 of 4	2.54	Up
Larval fat body	20 ± 3	3 of 4	0.10	Down
Larval trachea	1676 ± 114	4 of 4	5.75	Up
Larval carcass	331 ± 14	4 of 4	1.13	None
S2 cells (growing)	76 ± 9	4 of 4	0.26	Down
Whole fly	291 ± 10	4 of 4

Looking for FBgn0038198. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720