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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0038205 through 18771 annotations produced 1 hits



Kif19A (Kif19A):

Annotation Number : CG9913
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038205
Gbrowse : chr3R:9938344-9940949 (-) // 100.0 //
Probeset : 1632346_at
Accessions : protein= NP_996208;, nucleotide= NM_206486;
Pathway : 0005871 // kinesin complex // inferred from sequence or structural similarity /// 0005874 // microtubule // inferred fro
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from elec
FlyMine data for FBgn0038205.
Homophila reports that CG9913 is a close match (5e-32) to human gene CFEOM1;FEOM1;KIAA1708;KIF21A (NP_060111), a gene associated with Fibrosis of extraocular muscles, congenital, 1, 135700 (3).
TRiP has 1 RNAi stocks for FBgn0038205 available for purchase.
VDRC has 3 RNAi stocks for FBgn0038205 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 10 of 4 1.00None
Head3 ± 10 of 4 0.90None
Eye3 ± 10 of 4 0.92None
Thoracicoabdominal ganglion5 ± 21 of 4 1.40None
Salivary gland2 ± 00 of 4 0.56None
Crop1 ± 00 of 4 0.40None
Midgut1 ± 00 of 4 0.30None
Tubule3 ± 00 of 4 0.90None
Hindgut1 ± 00 of 4 0.50None
Heart1 ± 00 of 4 0.26None
Fat body9 ± 20 of 4 2.48Up
Ovary0 ± 00 of 4 0.10None
Testis1 ± 00 of 4 0.50None
Male accessory glands2 ± 10 of 4 0.60None
Virgin spermatheca6 ± 10 of 4 1.69None
Mated spermatheca6 ± 00 of 4 1.55None
Adult carcass6 ± 20 of 4 1.60None
Larval CNS3 ± 10 of 4 0.86None
Larval Salivary gland4 ± 10 of 4 1.21None
Larval midgut1 ± 00 of 4 0.50None
Larval tubule2 ± 10 of 4 0.60None
Larval hindgut3 ± 10 of 4 0.97None
Larval fat body1 ± 00 of 4 0.30None
Larval trachea2 ± 10 of 4 0.62None
Larval carcass7 ± 20 of 4 1.95None
S2 cells (growing)3 ± 00 of 4 0.87None
Whole fly3 ± 10 of 4

Looking for FBgn0038205. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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