Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0038207 through 18771 annotations produced 1 hits



(CG14356):

Annotation Number : CG14356
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038207
Gbrowse : chr3R:9956399-9957791 (-) // 100.0 //
Probeset : 1636879_at
Accessions : protein= NP_650339;, nucleotide= NM_142082;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0038207.
BDGP gene expression has embryonic in situ data for CG14356: 13 pix of staining in 8 body parts.
VDRC has 2 RNAi stocks for FBgn0038207 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.10Down
Head27 ± 24 of 4 1.30None
Eye2 ± 10 of 4 0.10Down
Thoracicoabdominal ganglion2 ± 00 of 4 0.10Down
Salivary gland265 ± 214 of 412.33Up
Crop1797 ± 574 of 483.50Up
Midgut39 ± 14 of 4 1.80Up
Tubule2 ± 00 of 4 0.10Down
Hindgut215 ± 64 of 410.00Up
Heart0 ± 00 of 4 0.01Down
Fat body1 ± 10 of 4 0.06Down
Ovary11 ± 12 of 4 0.50Down
Testis1 ± 10 of 4 0.10Down
Male accessory glands1 ± 00 of 4 0.10Down
Virgin spermatheca1 ± 00 of 4 0.04Down
Mated spermatheca0 ± 00 of 4 0.04Down
Adult carcass3 ± 20 of 4 0.20Down
Larval CNS0 ± 00 of 4 0.03Down
Larval Salivary gland170 ± 134 of 4 7.92Up
Larval midgut12 ± 11 of 4 0.56Down
Larval tubule8 ± 10 of 4 0.40Down
Larval hindgut304 ± 344 of 414.13Up
Larval fat body6 ± 20 of 4 0.30Down
Larval trachea35 ± 54 of 4 1.66Up
Larval carcass73 ± 204 of 4 3.39None
S2 cells (growing)1 ± 00 of 4 0.05Down
Whole fly21 ± 04 of 4

Looking for FBgn0038207. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime