FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038257 through 18771 annotations produced 2 hits

Drosophila cold acclimation gene (smp-30):

Annotation Number : CG7390
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038257
Gbrowse : chr3R:10571622-10573043 (-) // 100.0 //
Probeset : 1636973_at
Accessions : protein= NP_524353; /// NP_731942;, nucleotide= NM_079629; /// NM_169602;
FlyMine data for FBgn0038257.
BDGP gene expression has embryonic in situ data for smp-30: 9 pix of staining in 2 body parts.
VDRC has 3 RNAi stocks for FBgn0038257 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.10	Down
Head	53 ± 10	4 of 4	1.90	None
Eye	7 ± 0	4 of 4	0.28	Down
Thoracicoabdominal ganglion	3 ± 1	0 of 4	0.10	Down
Salivary gland	1 ± 0	0 of 4	0.06	Down
Crop	2 ± 0	0 of 4	0.10	Down
Midgut	129 ± 17	4 of 4	4.70	Up
Tubule	480 ± 38	4 of 4	17.30	Up
Hindgut	57 ± 10	4 of 4	2.10	None
Heart	31 ± 3	4 of 4	1.14	None
Fat body	240 ± 31	4 of 4	8.65	Up
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	0 ± 0	0 of 4	0.00	Down
Male accessory glands	3 ± 2	0 of 4	0.10	Down
Virgin spermatheca	435 ± 15	4 of 4	15.66	Up
Mated spermatheca	366 ± 64	4 of 4	13.21	Up
Adult carcass	53 ± 5	4 of 4	1.90	Up
Larval CNS	1 ± 0	0 of 4	0.06	Down
Larval Salivary gland	9 ± 2	2 of 4	0.33	Down
Larval midgut	39 ± 5	4 of 4	1.42	None
Larval tubule	21 ± 4	4 of 4	0.80	None
Larval hindgut	20 ± 4	4 of 4	0.75	None
Larval fat body	4 ± 1	1 of 4	0.10	Down
Larval trachea	3 ± 1	0 of 4	0.11	Down
Larval carcass	1 ± 0	0 of 4	0.05	Down
S2 cells (growing)	3 ± 1	0 of 4	0.12	Down
Whole fly	27 ± 3	4 of 4

Drosophila cold acclimation gene (smp-30):

Annotation Number : CG7390
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038257
Gbrowse : chr3R:10571811-10573043 (-) // 100.0 //
Probeset : 1635450_a_at
Accessions : protein= NP_524353; /// NP_731942;, nucleotide= NM_079629; /// NM_169602;
FlyMine data for FBgn0038257.
BDGP gene expression has embryonic in situ data for smp-30: 9 pix of staining in 2 body parts.
VDRC has 3 RNAi stocks for FBgn0038257 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	14 ± 0	4 of 4	0.10	Down
Head	339 ± 80	4 of 4	1.50	None
Eye	71 ± 9	4 of 4	0.32	Down
Thoracicoabdominal ganglion	17 ± 2	4 of 4	0.10	Down
Salivary gland	15 ± 1	1 of 4	0.07	Down
Crop	7 ± 1	1 of 4	0.00	Down
Midgut	1553 ± 116	4 of 4	6.90	Up
Tubule	4361 ± 116	4 of 4	19.40	Up
Hindgut	571 ± 63	4 of 4	2.50	Up
Heart	499 ± 43	4 of 4	2.23	Up
Fat body	1188 ± 142	4 of 4	5.29	Up
Ovary	3 ± 1	0 of 4	0.00	Down
Testis	37 ± 2	4 of 4	0.20	Down
Male accessory glands	7 ± 2	0 of 4	0.00	Down
Virgin spermatheca	1189 ± 70	4 of 4	5.30	Up
Mated spermatheca	1191 ± 117	4 of 4	5.31	Up
Adult carcass	737 ± 45	4 of 4	3.30	Up
Larval CNS	3 ± 2	0 of 4	0.02	Down
Larval Salivary gland	70 ± 6	4 of 4	0.31	Down
Larval midgut	227 ± 26	4 of 4	1.01	None
Larval tubule	158 ± 29	4 of 4	0.70	None
Larval hindgut	114 ± 10	4 of 4	0.51	Down
Larval fat body	51 ± 23	3 of 4	0.20	Down
Larval trachea	10 ± 6	3 of 4	0.05	Down
Larval carcass	9 ± 0	2 of 4	0.04	Down
S2 cells (growing)	7 ± 1	3 of 4	0.04	Down
Whole fly	224 ± 10	4 of 4

Looking for FBgn0038257. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720