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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0038262 through 18771 annotations produced 1 hits



(CG14857):

Annotation Number : CG14857
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038262
Gbrowse : chr3R:10627526-10629708 (+) // 100.0 //
Probeset : 1631846_at
Accessions : protein= NP_650392;, nucleotide= NM_142135;
Interpro : 0008513 // secondary active organic cation transmembrane transporter activity // inferred from sequence or structural si
FlyMine data for FBgn0038262.
Homophila reports that CG14857 is a close match (3e-20) to human gene OAT4L;SLC22A12;URAT1 (NP_653186), a gene associated with Hypouricemia, renal, 220150 (3).


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain7 ± 11 of 4 0.90None
Head4 ± 20 of 4 0.60None
Eye2 ± 10 of 4 0.26Down
Thoracicoabdominal ganglion6 ± 20 of 4 0.70None
Salivary gland1 ± 00 of 4 0.20Down
Crop1 ± 00 of 4 0.20Down
Midgut18 ± 13 of 4 2.10Up
Tubule182 ± 34 of 420.90Up
Hindgut20 ± 31 of 4 2.30Up
Heart2 ± 00 of 4 0.26Down
Fat body5 ± 10 of 4 0.68None
Ovary1 ± 00 of 4 0.20Down
Testis3 ± 10 of 4 0.30Down
Male accessory glands1 ± 00 of 4 0.20Down
Virgin spermatheca1 ± 00 of 4 0.18Down
Mated spermatheca1 ± 00 of 4 0.12Down
Adult carcass4 ± 20 of 4 0.50None
Larval CNS1 ± 10 of 4 0.18Down
Larval Salivary gland1 ± 00 of 4 0.16Down
Larval midgut9 ± 10 of 4 1.13None
Larval tubule292 ± 124 of 433.60Up
Larval hindgut2 ± 10 of 4 0.32Down
Larval fat body4 ± 20 of 4 0.50None
Larval trachea1 ± 10 of 4 0.17Down
Larval carcass4 ± 10 of 4 0.56None
S2 cells (growing)3 ± 10 of 4 0.42Down
Whole fly8 ± 00 of 4

Looking for FBgn0038262. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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