Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0038268 through 18771 annotations produced 1 hits



(CG3631):

Annotation Number : CG3631
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038268
Gbrowse : chr3R:10705162-10708348 (+) // 100.0 //
Probeset : 1630342_s_at
Accessions : protein= NP_731951; /// NP_996212;, nucleotide= NM_169605; /// NM_206490;
FlyMine data for FBgn0038268.
Homophila reports that CG3631 is a close match (1e-52) to human gene DMP4;FAM20C (NP_064608), a gene associated with Raine syndrome, 259775 (3).
VDRC has 1 RNAi stocks for FBgn0038268 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain48 ± 54 of 4 1.10None
Head35 ± 34 of 4 0.80None
Eye26 ± 14 of 4 0.59Down
Thoracicoabdominal ganglion45 ± 24 of 4 1.00None
Salivary gland45 ± 14 of 4 1.02None
Crop38 ± 34 of 4 0.90None
Midgut37 ± 14 of 4 0.80Down
Tubule26 ± 34 of 4 0.60Down
Hindgut29 ± 14 of 4 0.70Down
Heart22 ± 24 of 4 0.50Down
Fat body62 ± 104 of 4 1.41Up
Ovary107 ± 24 of 4 2.40Up
Testis9 ± 14 of 4 0.20Down
Male accessory glands43 ± 04 of 4 1.00None
Virgin spermatheca51 ± 24 of 4 1.16None
Mated spermatheca61 ± 04 of 4 1.39Up
Adult carcass52 ± 74 of 4 1.20None
Larval CNS66 ± 94 of 4 1.49Up
Larval Salivary gland62 ± 34 of 4 1.40Up
Larval midgut47 ± 14 of 4 1.06None
Larval tubule25 ± 34 of 4 0.60Down
Larval hindgut50 ± 34 of 4 1.14None
Larval fat body35 ± 34 of 4 0.80None
Larval trachea27 ± 64 of 4 0.63Down
Larval carcass39 ± 24 of 4 0.90None
S2 cells (growing)50 ± 34 of 4 1.12None
Whole fly44 ± 14 of 4

Looking for FBgn0038268. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime