FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038271 through 18771 annotations produced 1 hits

Ubiquinol-cytochrome c oxidoreductase Core protein 1 (CG3731):

Annotation Number : CG3731
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038271
Gbrowse : chr3R:10715799-10718109 (+) // 100.0 //
Probeset : 1636813_s_at
Accessions : protein= NP_650401; /// NP_731954;, nucleotide= NM_142144; /// NM_169607;
Pathway : ubiquinol to cytochrome c // inferred from sequence or structural similarity /// 0006508 // proteolysis // inferred fro
Interpro : 0005750 // mitochondrial respiratory chain complex III // inferred from sequence or structural similarity /// 0005759 //
FlyMine data for FBgn0038271.
BDGP gene expression has embryonic in situ data for CG3731: 11 pix of staining in 9 body parts.
BioGrid reports that CG3731 interacts with CG4303 CG5099 CG5642 CG7417 CG9102 CG9654 .
VDRC has 3 RNAi stocks for FBgn0038271 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1595 ± 32	4 of 4	1.00	None
Head	1901 ± 62	4 of 4	1.20	Up
Eye	1761 ± 52	4 of 4	1.08	None
Thoracicoabdominal ganglion	2012 ± 31	4 of 4	1.20	Up
Salivary gland	2652 ± 83	4 of 4	1.63	Up
Crop	1727 ± 46	4 of 4	1.10	None
Midgut	1575 ± 56	4 of 4	1.00	None
Tubule	2162 ± 31	4 of 4	1.30	Up
Hindgut	2722 ± 63	4 of 4	1.70	Up
Heart	2099 ± 105	4 of 4	1.29	Up
Fat body	1824 ± 174	4 of 4	1.12	None
Ovary	912 ± 12	4 of 4	0.60	Down
Testis	853 ± 24	4 of 4	0.50	Down
Male accessory glands	576 ± 22	4 of 4	0.40	Down
Virgin spermatheca	1232 ± 78	4 of 4	0.76	Down
Mated spermatheca	1122 ± 16	4 of 4	0.69	Down
Adult carcass	3707 ± 165	4 of 4	2.30	Up
Larval CNS	760 ± 43	4 of 4	0.47	Down
Larval Salivary gland	1114 ± 32	4 of 4	0.69	Down
Larval midgut	1384 ± 83	4 of 4	0.85	None
Larval tubule	1076 ± 100	4 of 4	0.70	Down
Larval hindgut	1944 ± 77	4 of 4	1.20	Up
Larval fat body	534 ± 22	4 of 4	0.30	Down
Larval trachea	593 ± 22	4 of 4	0.37	Down
Larval carcass	1628 ± 150	4 of 4	1.00	None
S2 cells (growing)	877 ± 14	4 of 4	0.54	Down
Whole fly	1625 ± 28	4 of 4

Looking for FBgn0038271. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720