FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038282 through 18771 annotations produced 2 hits

dpr9 (dpr9):

Annotation Number : CG31114
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038282
Gbrowse : chr3R:10892146-10902927 (-) // 100.0 //
Probeset : 1626748_at
Accessions : protein= NP_996215;, nucleotide= NM_206493;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0038282.
TRiP has 1 RNAi stocks for FBgn0038282 available for purchase.
VDRC has 5 RNAi stocks for FBgn0038282 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	32 ± 3	4 of 4	7.50	Up
Head	6 ± 3	0 of 4	1.50	None
Eye	2 ± 1	0 of 4	0.66	None
Thoracicoabdominal ganglion	18 ± 6	3 of 4	4.30	None
Salivary gland	18 ± 4	0 of 4	4.13	None
Crop	2 ± 1	0 of 4	0.70	None
Midgut	6 ± 1	0 of 4	1.40	None
Tubule	4 ± 0	0 of 4	0.90	None
Hindgut	3 ± 0	0 of 4	0.90	None
Heart	1 ± 0	0 of 4	0.36	None
Fat body	2 ± 3	0 of 4	0.59	None
Ovary	1 ± 0	0 of 4	0.40	None
Testis	2 ± 1	0 of 4	0.60	None
Male accessory glands	5 ± 2	0 of 4	1.20	None
Virgin spermatheca	0 ± 0	0 of 4	0.20	None
Mated spermatheca	1 ± 0	0 of 4	0.33	None
Adult carcass	7 ± 2	0 of 4	1.80	None
Larval CNS	5 ± 2	1 of 4	1.29	None
Larval Salivary gland	4 ± 2	0 of 4	1.01	None
Larval midgut	1 ± 0	0 of 4	0.43	None
Larval tubule	3 ± 1	0 of 4	0.90	None
Larval hindgut	3 ± 1	0 of 4	0.72	None
Larval fat body	4 ± 2	0 of 4	1.00	None
Larval trachea	2 ± 2	0 of 4	0.55	None
Larval carcass	2 ± 0	0 of 4	0.49	None
S2 cells (growing)	2 ± 0	0 of 4	0.54	None
Whole fly	4 ± 1	0 of 4

dpr9 (dpr9):

Annotation Number : CG12601
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038282
Gbrowse : chr3R:10881679-10889064 (-) // 100.0 //
Probeset : 1632889_at
Accessions : protein= NP_996215;, nucleotide= NM_206493;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0038282.
TRiP has 1 RNAi stocks for FBgn0038282 available for purchase.
VDRC has 5 RNAi stocks for FBgn0038282 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	378 ± 23	4 of 4	30.90	Up
Head	74 ± 9	4 of 4	6.00	Up
Eye	26 ± 1	4 of 4	2.19	Up
Thoracicoabdominal ganglion	162 ± 14	4 of 4	13.30	Up
Salivary gland	3 ± 0	0 of 4	0.26	Down
Crop	2 ± 1	0 of 4	0.20	Down
Midgut	0 ± 0	0 of 4	0.00	Down
Tubule	1 ± 0	0 of 4	0.10	Down
Hindgut	0 ± 0	0 of 4	0.00	Down
Heart	1 ± 0	0 of 4	0.14	Down
Fat body	14 ± 5	2 of 4	1.15	None
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	4 ± 0	0 of 4	0.40	Down
Male accessory glands	0 ± 0	0 of 4	0.10	Down
Virgin spermatheca	3 ± 1	0 of 4	0.24	Down
Mated spermatheca	6 ± 1	1 of 4	0.53	None
Adult carcass	1 ± 0	0 of 4	0.10	Down
Larval CNS	109 ± 13	4 of 4	8.92	Up
Larval Salivary gland	2 ± 0	0 of 4	0.20	Down
Larval midgut	1 ± 0	0 of 4	0.10	Down
Larval tubule	1 ± 0	0 of 4	0.10	Down
Larval hindgut	3 ± 1	0 of 4	0.28	Down
Larval fat body	0 ± 0	0 of 4	0.10	Down
Larval trachea	0 ± 0	0 of 4	0.08	Down
Larval carcass	0 ± 0	0 of 4	0.06	Down
S2 cells (growing)	0 ± 0	0 of 4	0.04	Down
Whole fly	12 ± 1	3 of 4

Looking for FBgn0038282. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720