FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038319 through 18771 annotations produced 1 hits

mitochondrial ribosomal protein L9 (mRpL9):

Annotation Number : CG31478
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038319
Gbrowse : chr3R:11156461-11157310 (+) // 99.5 //
Probeset : 1640252_at
Accessions : protein= NP_524363;, nucleotide= NM_079639;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic
Interpro : 0003735 // structural constituent of ribosome // inferred from sequence or structural similarity /// 0003735 // structur
FlyMine data for FBgn0038319.
BDGP gene expression has embryonic in situ data for mRpL9: 13 pix of staining in 15 body parts.
BioGrid reports that CG31478 interacts with CG6667 .
VDRC has 2 RNAi stocks for FBgn0038319 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	166 ± 6	4 of 4	0.80	None
Head	160 ± 6	4 of 4	0.80	Down
Eye	141 ± 6	4 of 4	0.69	Down
Thoracicoabdominal ganglion	189 ± 7	4 of 4	0.90	None
Salivary gland	177 ± 8	4 of 4	0.86	None
Crop	157 ± 5	4 of 4	0.80	Down
Midgut	189 ± 4	4 of 4	0.90	None
Tubule	122 ± 1	4 of 4	0.60	Down
Hindgut	190 ± 3	4 of 4	0.90	None
Heart	144 ± 1	4 of 4	0.70	Down
Fat body	144 ± 15	4 of 4	0.70	Down
Ovary	309 ± 9	4 of 4	1.50	Up
Testis	57 ± 1	4 of 4	0.30	Down
Male accessory glands	246 ± 4	4 of 4	1.20	Up
Virgin spermatheca	172 ± 6	4 of 4	0.84	Down
Mated spermatheca	174 ± 10	4 of 4	0.85	None
Adult carcass	168 ± 6	4 of 4	0.80	Down
Larval CNS	209 ± 19	4 of 4	1.02	None
Larval Salivary gland	285 ± 10	4 of 4	1.39	Up
Larval midgut	144 ± 8	4 of 4	0.70	Down
Larval tubule	120 ± 3	4 of 4	0.60	Down
Larval hindgut	189 ± 8	4 of 4	0.92	None
Larval fat body	74 ± 8	4 of 4	0.40	Down
Larval trachea	207 ± 12	4 of 4	1.01	None
Larval carcass	173 ± 10	4 of 4	0.84	None
S2 cells (growing)	117 ± 2	4 of 4	0.57	Down
Whole fly	206 ± 9	4 of 4

Looking for FBgn0038319. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720