FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038344 through 18771 annotations produced 2 hits

(CG5205):

Annotation Number : CG5205
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038344
Gbrowse : chr3R:11317888-11318576 (+) // 100.0 //
Probeset : 1641576_a_at
Accessions : protein= NP_650472;, nucleotide= NM_142215;
Pathway : via spliceosome // inferred from sequence or structural similarity"
Interpro : 0005682 // U5 snRNP // inferred from sequence or structural similarity /// 0030532 // small nuclear ribonucleoprotein co
FlyMine data for FBgn0038344.
BDGP gene expression has embryonic in situ data for CG5205: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0038344 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	33 ± 1	4 of 4	0.70	Down
Head	24 ± 2	4 of 4	0.50	Down
Eye	20 ± 2	4 of 4	0.43	Down
Thoracicoabdominal ganglion	28 ± 2	4 of 4	0.60	Down
Salivary gland	67 ± 3	4 of 4	1.42	Up
Crop	34 ± 3	4 of 4	0.70	Down
Midgut	59 ± 4	4 of 4	1.30	Up
Tubule	36 ± 5	4 of 4	0.80	Down
Hindgut	39 ± 1	4 of 4	0.80	Down
Heart	20 ± 0	4 of 4	0.43	Down
Fat body	29 ± 5	4 of 4	0.62	Down
Ovary	101 ± 2	4 of 4	2.10	Up
Testis	27 ± 3	4 of 4	0.60	Down
Male accessory glands	56 ± 3	4 of 4	1.20	None
Virgin spermatheca	21 ± 2	4 of 4	0.45	Down
Mated spermatheca	19 ± 1	4 of 4	0.41	Down
Adult carcass	24 ± 3	4 of 4	0.50	Down
Larval CNS	52 ± 6	4 of 4	1.10	None
Larval Salivary gland	84 ± 9	4 of 4	1.78	Up
Larval midgut	35 ± 1	4 of 4	0.75	Down
Larval tubule	65 ± 0	4 of 4	1.40	Up
Larval hindgut	37 ± 2	4 of 4	0.79	Down
Larval fat body	61 ± 5	4 of 4	1.30	None
Larval trachea	48 ± 7	4 of 4	1.01	None
Larval carcass	43 ± 4	4 of 4	0.92	None
S2 cells (growing)	132 ± 2	4 of 4	2.80	Up
Whole fly	47 ± 1	4 of 4

(CG5205):

Annotation Number : CG5205
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038344
Gbrowse : chr3R:11311864-11319033 (+) // 100.0 //
Probeset : 1628807_at
Accessions : protein= NP_650472;, nucleotide= NM_142215;
Pathway : via spliceosome // inferred from sequence or structural similarity"
Interpro : 0005682 // U5 snRNP // inferred from sequence or structural similarity /// 0030532 // small nuclear ribonucleoprotein co
FlyMine data for FBgn0038344.
BDGP gene expression has embryonic in situ data for CG5205: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0038344 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	79 ± 4	4 of 4	0.70	Down
Head	68 ± 2	4 of 4	0.60	Down
Eye	67 ± 4	4 of 4	0.59	Down
Thoracicoabdominal ganglion	86 ± 1	4 of 4	0.80	Down
Salivary gland	147 ± 9	4 of 4	1.29	Up
Crop	107 ± 5	4 of 4	0.90	None
Midgut	160 ± 6	4 of 4	1.40	Up
Tubule	153 ± 15	4 of 4	1.30	Up
Hindgut	83 ± 1	4 of 4	0.70	Down
Heart	77 ± 4	4 of 4	0.68	Down
Fat body	103 ± 10	4 of 4	0.91	None
Ovary	268 ± 6	4 of 4	2.40	Up
Testis	57 ± 1	4 of 4	0.50	Down
Male accessory glands	160 ± 11	4 of 4	1.40	Up
Virgin spermatheca	240 ± 28	4 of 4	2.12	Up
Mated spermatheca	222 ± 9	4 of 4	1.96	Up
Adult carcass	64 ± 1	4 of 4	0.60	Down
Larval CNS	149 ± 4	4 of 4	1.32	Up
Larval Salivary gland	199 ± 6	4 of 4	1.75	Up
Larval midgut	142 ± 2	4 of 4	1.25	Up
Larval tubule	177 ± 15	4 of 4	1.60	Up
Larval hindgut	105 ± 4	4 of 4	0.92	None
Larval fat body	141 ± 8	4 of 4	1.20	Up
Larval trachea	163 ± 17	4 of 4	1.44	Up
Larval carcass	140 ± 8	4 of 4	1.23	Up
S2 cells (growing)	186 ± 4	4 of 4	1.64	Up
Whole fly	113 ± 4	4 of 4

Looking for FBgn0038344. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720