Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0038421 through 18771 annotations produced 1 hits



/// (CG17931 /// CG42446):

Annotation Number : CG17931
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038421 /// FBgn0259917
Gbrowse : chr3R:12183865-12185774 (-) // 100.0 //
Probeset : 1640455_a_at
Accessions : protein= NP_650537; /// NP_732133;, nucleotide= NM_142280; /// NM_169715;
FlyMine data for FBgn0038421 /// FBgn0259917.
BioGrid reports that CG17931 interacts with CG7399 .


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain768 ± 114 of 4 0.90None
Head741 ± 204 of 4 0.90Down
Eye1136 ± 394 of 4 1.30Up
Thoracicoabdominal ganglion971 ± 284 of 4 1.10Up
Salivary gland1656 ± 674 of 4 1.90Up
Crop767 ± 134 of 4 0.90Down
Midgut653 ± 94 of 4 0.70Down
Tubule911 ± 94 of 4 1.00Up
Hindgut575 ± 54 of 4 0.70Down
Heart715 ± 254 of 4 0.82Down
Fat body668 ± 684 of 4 0.77Down
Ovary1356 ± 74 of 4 1.60Up
Testis1334 ± 104 of 4 1.50Up
Male accessory glands2020 ± 724 of 4 2.30Up
Virgin spermatheca1355 ± 594 of 4 1.55Up
Mated spermatheca1866 ± 1264 of 4 2.14Up
Adult carcass625 ± 344 of 4 0.70Down
Larval CNS718 ± 1004 of 4 0.82Down
Larval Salivary gland1298 ± 344 of 4 1.49Up
Larval midgut592 ± 384 of 4 0.68Down
Larval tubule532 ± 84 of 4 0.60Down
Larval hindgut656 ± 184 of 4 0.75Down
Larval fat body785 ± 414 of 4 0.90None
Larval trachea799 ± 944 of 4 0.92None
Larval carcass882 ± 594 of 4 1.01None
S2 cells (growing)1015 ± 274 of 4 1.16Up
Whole fly872 ± 234 of 4

Looking for FBgn0038421. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime