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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0038446 through 18771 annotations produced 1 hits



(CG14903):

Annotation Number : CG14903
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038446
Gbrowse : chr3R:12398948-12399440 (-) // 100.0 //
Probeset : 1636660_at
Accessions : protein= NP_650561;, nucleotide= NM_142304;
Interpro : 0004045 // aminoacyl-tRNA hydrolase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phos
FlyMine data for FBgn0038446.
TRiP has 1 RNAi stocks for FBgn0038446 available for purchase.
VDRC has 5 RNAi stocks for FBgn0038446 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain263 ± 34 of 4 1.30Up
Head180 ± 74 of 4 0.90None
Eye215 ± 84 of 4 1.06None
Thoracicoabdominal ganglion245 ± 124 of 4 1.20Up
Salivary gland359 ± 94 of 4 1.77Up
Crop231 ± 64 of 4 1.10Up
Midgut229 ± 104 of 4 1.10None
Tubule124 ± 54 of 4 0.60Down
Hindgut286 ± 154 of 4 1.40Up
Heart204 ± 94 of 4 1.01None
Fat body116 ± 134 of 4 0.57Down
Ovary273 ± 74 of 4 1.40Up
Testis125 ± 104 of 4 0.60Down
Male accessory glands196 ± 44 of 4 1.00None
Virgin spermatheca146 ± 54 of 4 0.72Down
Mated spermatheca153 ± 74 of 4 0.76Down
Adult carcass125 ± 174 of 4 0.60Down
Larval CNS250 ± 104 of 4 1.24Up
Larval Salivary gland315 ± 204 of 4 1.55Up
Larval midgut216 ± 94 of 4 1.07None
Larval tubule266 ± 124 of 4 1.30Up
Larval hindgut262 ± 24 of 4 1.30Up
Larval fat body184 ± 174 of 4 0.90None
Larval trachea313 ± 54 of 4 1.55Up
Larval carcass234 ± 74 of 4 1.16Up
S2 cells (growing)162 ± 64 of 4 0.80Down
Whole fly202 ± 84 of 4

Looking for FBgn0038446. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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