FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038476 through 18771 annotations produced 1 hits

kugelkern (kuk):

Annotation Number : CG5175
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038476
Gbrowse : chr3R:12908111-12910550 (+) // 100.0 //
Probeset : 1623919_a_at
Accessions : protein= NP_650595; /// NP_732204;, nucleotide= NM_142338; /// NM_169745;
Pathway : 0005637 // nuclear inner membrane // inferred from direct assay /// 0005811 // lipid particle // inferred from direct as
FlyMine data for FBgn0038476.
BDGP gene expression has embryonic in situ data for CG5175: 24 pix of staining in 12 body parts.
BioGrid reports that CG5175 interacts with CG8929 .
TRiP has 3 RNAi stocks for FBgn0038476 available for purchase.
VDRC has 3 RNAi stocks for FBgn0038476 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	713 ± 9	4 of 4	1.00	None
Head	475 ± 13	4 of 4	0.70	Down
Eye	760 ± 43	4 of 4	1.07	None
Thoracicoabdominal ganglion	837 ± 22	4 of 4	1.20	Up
Salivary gland	158 ± 11	4 of 4	0.22	Down
Crop	987 ± 26	4 of 4	1.40	Up
Midgut	70 ± 3	0 of 4	0.10	Down
Tubule	33 ± 12	3 of 4	0.00	Down
Hindgut	71 ± 2	4 of 4	0.10	Down
Heart	128 ± 6	4 of 4	0.18	Down
Fat body	60 ± 7	4 of 4	0.08	Down
Ovary	1818 ± 41	4 of 4	2.50	Up
Testis	463 ± 22	4 of 4	0.70	Down
Male accessory glands	396 ± 15	4 of 4	0.60	Down
Virgin spermatheca	61 ± 3	4 of 4	0.09	Down
Mated spermatheca	65 ± 7	4 of 4	0.09	Down
Adult carcass	257 ± 12	4 of 4	0.40	Down
Larval CNS	1772 ± 63	4 of 4	2.49	Up
Larval Salivary gland	40 ± 3	4 of 4	0.06	Down
Larval midgut	114 ± 26	2 of 4	0.16	Down
Larval tubule	68 ± 7	4 of 4	0.10	Down
Larval hindgut	72 ± 4	4 of 4	0.10	Down
Larval fat body	195 ± 20	4 of 4	0.30	Down
Larval trachea	343 ± 51	4 of 4	0.48	Down
Larval carcass	227 ± 21	4 of 4	0.32	Down
S2 cells (growing)	1078 ± 36	4 of 4	1.51	Up
Whole fly	713 ± 11	4 of 4

Looking for FBgn0038476. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720