FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038499 through 18771 annotations produced 1 hits

Brf (Brf):

Annotation Number : CG31256
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038499
Gbrowse : chr3R:13200554-13217054 (-) // 100.0 //
Probeset : 1626187_at
Accessions : protein= NP_001163636; /// NP_650616;, nucleotide= NM_001170165; /// NM_142359;
Pathway : DNA-dependent // inferred from electronic annotation /// 0006359 // regulation of transcription from RNA polymerase III
Interpro : 0000126 // transcription factor TFIIIB complex // inferred from sequence or structural similarity /// 0005634 // nucleus
FlyMine data for FBgn0038499.
BDGP gene expression has embryonic in situ data for Brf: 13 pix of staining in 11 body parts.
BioGrid reports that CG31256 interacts with CG7562 .
TRiP has 2 RNAi stocks for FBgn0038499 available for purchase.
VDRC has 3 RNAi stocks for FBgn0038499 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	95 ± 3	4 of 4	2.00	Up
Head	61 ± 3	4 of 4	1.30	Up
Eye	58 ± 1	4 of 4	1.20	None
Thoracicoabdominal ganglion	99 ± 6	4 of 4	2.10	Up
Salivary gland	57 ± 5	2 of 4	1.19	None
Crop	90 ± 3	4 of 4	1.90	Up
Midgut	51 ± 3	4 of 4	1.10	None
Tubule	68 ± 3	4 of 4	1.40	Up
Hindgut	52 ± 2	4 of 4	1.10	None
Heart	36 ± 2	4 of 4	0.76	Down
Fat body	42 ± 6	4 of 4	0.88	None
Ovary	94 ± 2	4 of 4	2.00	Up
Testis	8 ± 1	2 of 4	0.20	Down
Male accessory glands	31 ± 4	2 of 4	0.70	Down
Virgin spermatheca	47 ± 1	4 of 4	0.99	None
Mated spermatheca	58 ± 4	4 of 4	1.21	None
Adult carcass	50 ± 4	4 of 4	1.00	None
Larval CNS	180 ± 10	4 of 4	3.74	Up
Larval Salivary gland	45 ± 1	1 of 4	0.93	None
Larval midgut	54 ± 3	4 of 4	1.13	None
Larval tubule	94 ± 7	4 of 4	2.00	Up
Larval hindgut	71 ± 3	4 of 4	1.48	Up
Larval fat body	93 ± 10	4 of 4	1.90	Up
Larval trachea	62 ± 6	4 of 4	1.28	Up
Larval carcass	104 ± 11	4 of 4	2.16	Up
S2 cells (growing)	160 ± 3	4 of 4	3.33	Up
Whole fly	48 ± 3	4 of 4

Looking for FBgn0038499. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720