FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038510 through 18771 annotations produced 1 hits

(CG14331):

Annotation Number : CG14331
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038510
Gbrowse : chr3R:13264869-13266426 (-) // 100.0 //
Probeset : 1628499_at
Accessions : protein= NP_001097824; /// NP_650626;, nucleotide= NM_001104354; /// NM_142369;
FlyMine data for FBgn0038510.
VDRC has 2 RNAi stocks for FBgn0038510 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	25 ± 2	4 of 4	8.00	Up
Head	9 ± 2	0 of 4	2.90	None
Eye	0 ± 0	0 of 4	0.25	None
Thoracicoabdominal ganglion	36 ± 3	3 of 4	11.40	Up
Salivary gland	14 ± 1	0 of 4	4.67	Up
Crop	4 ± 2	0 of 4	1.40	None
Midgut	2 ± 0	0 of 4	0.60	None
Tubule	4 ± 0	0 of 4	1.30	Up
Hindgut	1 ± 0	0 of 4	0.40	None
Heart	2 ± 1	0 of 4	0.68	None
Fat body	2 ± 0	0 of 4	0.74	None
Ovary	1 ± 0	0 of 4	0.40	None
Testis	1 ± 0	0 of 4	0.40	None
Male accessory glands	5 ± 2	0 of 4	1.90	None
Virgin spermatheca	4 ± 1	0 of 4	1.29	None
Mated spermatheca	1 ± 0	0 of 4	0.52	None
Adult carcass	6 ± 2	0 of 4	1.90	None
Larval CNS	23 ± 2	2 of 4	7.47	Up
Larval Salivary gland	1 ± 0	0 of 4	0.44	None
Larval midgut	2 ± 0	0 of 4	0.83	None
Larval tubule	1 ± 0	0 of 4	0.50	None
Larval hindgut	1 ± 0	0 of 4	0.50	None
Larval fat body	1 ± 0	0 of 4	0.40	None
Larval trachea	1 ± 1	0 of 4	0.45	None
Larval carcass	3 ± 0	0 of 4	1.06	None
S2 cells (growing)	2 ± 1	0 of 4	0.88	None
Whole fly	3 ± 1	0 of 4

Looking for FBgn0038510. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720