Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0038531 through 18771 annotations produced 1 hits



(CG14325):

Annotation Number : CG14325
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038531
Gbrowse : chr3R:13452848-13454734 (+) // 100.0 //
Probeset : 1622985_at
Accessions : protein= NP_650641;, nucleotide= NM_142384;
Interpro : 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from
FlyMine data for FBgn0038531.
VDRC has 3 RNAi stocks for FBgn0038531 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 ± 20 of 4 1.10None
Head5 ± 10 of 4 1.00None
Eye0 ± 00 of 4 0.17Down
Thoracicoabdominal ganglion6 ± 10 of 4 1.30None
Salivary gland5 ± 20 of 4 1.14None
Crop5 ± 10 of 4 1.10None
Midgut9 ± 10 of 4 1.80None
Tubule4 ± 10 of 4 0.90None
Hindgut6 ± 11 of 4 1.30None
Heart3 ± 00 of 4 0.58None
Fat body9 ± 31 of 4 1.75None
Ovary2 ± 00 of 4 0.40None
Testis0 ± 00 of 4 0.20Down
Male accessory glands9 ± 20 of 4 1.70None
Virgin spermatheca6 ± 10 of 4 1.22None
Mated spermatheca1 ± 00 of 4 0.28Down
Adult carcass5 ± 20 of 4 1.00None
Larval CNS3 ± 00 of 4 0.61None
Larval Salivary gland3 ± 10 of 4 0.63None
Larval midgut11 ± 22 of 4 2.13None
Larval tubule4 ± 00 of 4 0.90None
Larval hindgut4 ± 00 of 4 0.88None
Larval fat body5 ± 10 of 4 1.00None
Larval trachea1 ± 10 of 4 0.29Down
Larval carcass5 ± 10 of 4 1.14None
S2 cells (growing)3 ± 10 of 4 0.73None
Whole fly5 ± 10 of 4

Looking for FBgn0038531. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime