FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038552 through 18771 annotations produced 1 hits

chr3R:13635116-13636854 (-) // 100.0 // ():

Annotation Number : CG18012
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1638157_at
Accessions : protein= , nucleotide= NP_650662;
Pathway : 0006486 // protein glycosylation // inferred from sequence or structural similarity /// 0009058 // biosynthetic process
FlyMine data for full length.
Homophila reports that CG18012 is a close match (7e-102) to human gene ALG1;HMAT1;HMT1 (NP_061982), a gene associated with Congenital disorder of glycosylation, type Ik, 608540 (3).
BioGrid reports that CG18012 interacts with CG7025 CG3668 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	86 ± 5	4 of 4	0.40	Down
Head	201 ± 6	4 of 4	0.90	None
Eye	181 ± 10	4 of 4	0.84	Down
Thoracicoabdominal ganglion	98 ± 3	4 of 4	0.50	Down
Salivary gland	359 ± 12	4 of 4	1.67	Up
Crop	242 ± 3	4 of 4	1.10	Up
Midgut	295 ± 11	4 of 4	1.40	Up
Tubule	175 ± 10	4 of 4	0.80	Down
Hindgut	203 ± 5	4 of 4	0.90	None
Heart	308 ± 13	4 of 4	1.43	Up
Fat body	407 ± 31	4 of 4	1.89	Up
Ovary	291 ± 6	4 of 4	1.40	Up
Testis	52 ± 3	4 of 4	0.20	Down
Male accessory glands	731 ± 19	4 of 4	3.40	Up
Virgin spermatheca	775 ± 11	4 of 4	3.59	Up
Mated spermatheca	761 ± 18	4 of 4	3.53	Up
Adult carcass	228 ± 19	4 of 4	1.10	None
Larval CNS	133 ± 10	4 of 4	0.62	Down
Larval Salivary gland	362 ± 20	4 of 4	1.68	Up
Larval midgut	267 ± 8	4 of 4	1.24	Up
Larval tubule	140 ± 6	4 of 4	0.70	Down
Larval hindgut	209 ± 14	4 of 4	0.97	None
Larval fat body	228 ± 18	4 of 4	1.10	None
Larval trachea	293 ± 42	4 of 4	1.36	Up
Larval carcass	144 ± 2	4 of 4	0.67	Down
S2 cells (growing)	406 ± 11	4 of 4	1.88	Up
Whole fly	215 ± 5	4 of 4

Looking for FBgn0038552. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720