FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038565 through 18771 annotations produced 1 hits

(CG7794):

Annotation Number : CG7794
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038565
Gbrowse : chr3R:13849428-13851100 (+) // 100.0 //
Probeset : 1634964_at
Accessions : protein= NP_650674;, nucleotide= NM_142417;
Pathway : 0005874 // microtubule // inferred from sequence or structural similarity /// 0005874 // microtubule // inferred from el
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from ele
FlyMine data for FBgn0038565.
BDGP gene expression has embryonic in situ data for CG7794: 8 pix of staining in 1 body parts.
Homophila reports that CG7794 is a close match (4e-140) to human gene LIS3;TUBA1A;TUBA3 (NP_006000), a gene associated with Lissencephaly 3, 611603 (3).
VDRC has 3 RNAi stocks for FBgn0038565 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	5 ± 1	0 of 4	0.10	Down
Head	2 ± 0	0 of 4	0.10	Down
Eye	2 ± 1	0 of 4	0.05	Down
Thoracicoabdominal ganglion	3 ± 0	0 of 4	0.10	Down
Salivary gland	1 ± 0	0 of 4	0.03	Down
Crop	2 ± 0	0 of 4	0.00	Down
Midgut	0 ± 0	0 of 4	0.00	Down
Tubule	2 ± 0	0 of 4	0.10	Down
Hindgut	3 ± 1	0 of 4	0.10	Down
Heart	1 ± 0	0 of 4	0.03	Down
Fat body	1 ± 0	0 of 4	0.02	Down
Ovary	1 ± 0	0 of 4	0.00	Down
Testis	774 ± 40	4 of 4	15.70	Up
Male accessory glands	3 ± 1	0 of 4	0.10	Down
Virgin spermatheca	1 ± 0	0 of 4	0.02	Down
Mated spermatheca	1 ± 0	0 of 4	0.03	Down
Adult carcass	2 ± 1	0 of 4	0.10	Down
Larval CNS	1 ± 1	0 of 4	0.04	Down
Larval Salivary gland	0 ± 0	0 of 4	0.02	Down
Larval midgut	1 ± 0	0 of 4	0.03	Down
Larval tubule	2 ± 1	0 of 4	0.10	Down
Larval hindgut	1 ± 0	0 of 4	0.04	Down
Larval fat body	61 ± 30	3 of 4	1.20	None
Larval trachea	2 ± 2	0 of 4	0.04	Down
Larval carcass	0 ± 0	0 of 4	0.02	Down
S2 cells (growing)	57 ± 2	4 of 4	1.16	None
Whole fly	49 ± 2	4 of 4

Looking for FBgn0038565. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720