FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038601 through 18771 annotations produced 1 hits

(CG18600):

Annotation Number : CG18600
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038601
Gbrowse : chr3R:14125917-14127458 (-) // 100.0 //
Probeset : 1634979_at
Accessions : protein= NP_650708;, nucleotide= NM_142451;
Pathway : 0005634 // nucleus // inferred from electronic annotation
Interpro : 0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inf
FlyMine data for FBgn0038601.
BDGP gene expression has embryonic in situ data for CG18600: 17 pix of staining in 14 body parts.
VDRC has 2 RNAi stocks for FBgn0038601 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	61 ± 2	4 of 4	0.30	Down
Head	70 ± 5	4 of 4	0.30	Down
Eye	76 ± 9	4 of 4	0.34	Down
Thoracicoabdominal ganglion	77 ± 2	4 of 4	0.30	Down
Salivary gland	95 ± 6	4 of 4	0.43	Down
Crop	122 ± 3	4 of 4	0.50	Down
Midgut	129 ± 4	4 of 4	0.60	Down
Tubule	87 ± 17	4 of 4	0.40	Down
Hindgut	73 ± 2	4 of 4	0.30	Down
Heart	83 ± 5	4 of 4	0.37	Down
Fat body	99 ± 8	4 of 4	0.44	Down
Ovary	426 ± 9	4 of 4	1.90	Up
Testis	210 ± 7	4 of 4	0.90	None
Male accessory glands	214 ± 12	4 of 4	1.00	None
Virgin spermatheca	71 ± 5	4 of 4	0.32	Down
Mated spermatheca	101 ± 4	4 of 4	0.45	Down
Adult carcass	75 ± 2	4 of 4	0.30	Down
Larval CNS	241 ± 13	4 of 4	1.08	None
Larval Salivary gland	163 ± 6	4 of 4	0.73	Down
Larval midgut	69 ± 6	4 of 4	0.31	Down
Larval tubule	54 ± 2	4 of 4	0.20	Down
Larval hindgut	113 ± 15	4 of 4	0.51	Down
Larval fat body	94 ± 25	4 of 4	0.40	Down
Larval trachea	186 ± 29	4 of 4	0.83	None
Larval carcass	161 ± 39	4 of 4	0.72	None
S2 cells (growing)	175 ± 4	4 of 4	0.78	Down
Whole fly	224 ± 3	4 of 4

Looking for FBgn0038601. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720