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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0038662 through 18771 annotations produced 1 hits



/// (CG14290 /// DbuzCG14290):

Annotation Number : CG14290
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038662
Gbrowse : chr3R:14752812-14754396 (-) // 100.0 //
Probeset : 1633597_at
Accessions : protein= NP_650762;, nucleotide= NM_142505;
FlyMine data for FBgn0038662.
BioGrid reports that CG14290 interacts with CG1829 CG6443 .
VDRC has 2 RNAi stocks for FBgn0038662 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain364 ± 144 of 4 0.50Down
Head899 ± 344 of 4 1.20Up
Eye620 ± 514 of 4 0.85None
Thoracicoabdominal ganglion405 ± 44 of 4 0.60Down
Salivary gland1602 ± 304 of 4 2.20Up
Crop590 ± 84 of 4 0.80Down
Midgut814 ± 184 of 4 1.10Up
Tubule2247 ± 504 of 4 3.10Up
Hindgut720 ± 154 of 4 1.00None
Heart861 ± 284 of 4 1.18Up
Fat body1570 ± 2334 of 4 2.16Up
Ovary419 ± 34 of 4 0.60Down
Testis1402 ± 264 of 4 1.90Up
Male accessory glands360 ± 34 of 4 0.50Down
Virgin spermatheca1733 ± 604 of 4 2.38Up
Mated spermatheca1655 ± 1114 of 4 2.28Up
Adult carcass1520 ± 874 of 4 2.10Up
Larval CNS161 ± 234 of 4 0.22Down
Larval Salivary gland353 ± 244 of 4 0.49Down
Larval midgut600 ± 344 of 4 0.83Down
Larval tubule1118 ± 514 of 4 1.50Up
Larval hindgut454 ± 234 of 4 0.62Down
Larval fat body381 ± 534 of 4 0.50Down
Larval trachea566 ± 984 of 4 0.78Down
Larval carcass407 ± 314 of 4 0.56Down
S2 cells (growing)177 ± 14 of 4 0.24Down
Whole fly727 ± 214 of 4

Looking for FBgn0038662. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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