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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0038695 through 18771 annotations produced 1 hits



(CG14280):

Annotation Number : CG14280
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038695
Gbrowse : chr3R:15082987-15085604 (+) // 100.0 //
Probeset : 1634723_at
Accessions : protein= NP_650797;, nucleotide= NM_142540;
FlyMine data for FBgn0038695.
VDRC has 1 RNAi stocks for FBgn0038695 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 1.10None
Head3 ± 01 of 4 2.50None
Eye2 ± 10 of 4 2.02None
Thoracicoabdominal ganglion4 ± 11 of 4 3.20None
Salivary gland8 ± 30 of 4 6.34None
Crop4 ± 10 of 4 3.10None
Midgut2 ± 10 of 4 1.90None
Tubule5 ± 11 of 4 4.20Up
Hindgut2 ± 10 of 4 2.00None
Heart4 ± 00 of 4 3.62Up
Fat body1 ± 10 of 4 1.19None
Ovary1 ± 00 of 4 1.20None
Testis6 ± 00 of 4 5.20Up
Male accessory glands10 ± 11 of 4 7.70Up
Virgin spermatheca1 ± 00 of 4 0.75None
Mated spermatheca0 ± 00 of 4 0.49None
Adult carcass4 ± 10 of 4 3.20None
Larval CNS0 ± 00 of 4 0.42None
Larval Salivary gland2 ± 00 of 4 1.91None
Larval midgut4 ± 10 of 4 3.04None
Larval tubule3 ± 01 of 4 2.90None
Larval hindgut1 ± 11 of 4 1.45None
Larval fat body1 ± 00 of 4 1.20None
Larval trachea1 ± 00 of 4 0.77None
Larval carcass0 ± 00 of 4 0.40None
S2 cells (growing)1 ± 00 of 4 1.02None
Whole fly1 ± 00 of 4

Looking for FBgn0038695. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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