FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038735 through 18771 annotations produced 3 hits

(CG4662):

Annotation Number : CG4662
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038735
Gbrowse : chr3R:15673044-15678698 (+) // 100.0 //
Probeset : 1627462_a_at
Accessions : protein= NP_001163657; /// NP_650833; /// NP_732455;, nucleotide= NM_001170186; /// NM_142576; /// NM_169877;
Interpro : 0005509 // calcium ion binding // inferred from electronic annotation
FlyMine data for FBgn0038735.
VDRC has 4 RNAi stocks for FBgn0038735 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	222 ± 8	4 of 4	3.10	Up
Head	142 ± 11	4 of 4	2.00	Up
Eye	166 ± 11	4 of 4	2.33	Up
Thoracicoabdominal ganglion	213 ± 14	4 of 4	3.00	Up
Salivary gland	80 ± 3	3 of 4	1.13	None
Crop	167 ± 13	4 of 4	2.30	Up
Midgut	42 ± 3	4 of 4	0.60	Down
Tubule	114 ± 9	4 of 4	1.60	Up
Hindgut	101 ± 4	4 of 4	1.40	Up
Heart	84 ± 5	4 of 4	1.18	None
Fat body	64 ± 4	4 of 4	0.90	None
Ovary	64 ± 3	4 of 4	0.90	None
Testis	198 ± 13	4 of 4	2.80	Up
Male accessory glands	73 ± 9	4 of 4	1.00	None
Virgin spermatheca	68 ± 3	4 of 4	0.96	None
Mated spermatheca	71 ± 3	4 of 4	1.01	None
Adult carcass	110 ± 8	4 of 4	1.50	Up
Larval CNS	62 ± 10	4 of 4	0.87	None
Larval Salivary gland	123 ± 6	0 of 4	1.73	Up
Larval midgut	41 ± 1	4 of 4	0.58	Down
Larval tubule	69 ± 6	4 of 4	1.00	None
Larval hindgut	104 ± 3	4 of 4	1.46	Up
Larval fat body	106 ± 4	4 of 4	1.50	Up
Larval trachea	77 ± 7	4 of 4	1.08	None
Larval carcass	220 ± 10	4 of 4	3.09	Up
S2 cells (growing)	126 ± 6	4 of 4	1.77	Up
Whole fly	71 ± 4	4 of 4

(CG4662):

Annotation Number : CG4662
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038735
Gbrowse : chr3R:15673044-15680125 (+) // 100.0 //
Probeset : 1635307_at
Accessions : protein= NP_001163657; /// NP_650833; /// NP_732455;, nucleotide= NM_001170186; /// NM_142576; /// NM_169877;
Interpro : 0005509 // calcium ion binding // inferred from electronic annotation
FlyMine data for FBgn0038735.
VDRC has 4 RNAi stocks for FBgn0038735 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	415 ± 13	4 of 4	11.80	Up
Head	143 ± 14	4 of 4	4.10	Up
Eye	121 ± 9	4 of 4	3.45	Up
Thoracicoabdominal ganglion	441 ± 14	4 of 4	12.50	Up
Salivary gland	27 ± 1	4 of 4	0.79	None
Crop	48 ± 1	4 of 4	1.40	Up
Midgut	70 ± 4	4 of 4	2.00	Up
Tubule	24 ± 1	4 of 4	0.70	Down
Hindgut	42 ± 2	4 of 4	1.20	None
Heart	45 ± 4	4 of 4	1.28	None
Fat body	77 ± 18	4 of 4	2.18	Up
Ovary	61 ± 5	4 of 4	1.70	Up
Testis	2 ± 0	1 of 4	0.10	Down
Male accessory glands	75 ± 4	4 of 4	2.10	Up
Virgin spermatheca	69 ± 5	4 of 4	1.96	Up
Mated spermatheca	55 ± 6	4 of 4	1.57	Up
Adult carcass	21 ± 2	4 of 4	0.60	Down
Larval CNS	145 ± 13	4 of 4	4.12	Up
Larval Salivary gland	93 ± 10	4 of 4	2.64	Up
Larval midgut	66 ± 7	4 of 4	1.88	Up
Larval tubule	72 ± 4	4 of 4	2.10	Up
Larval hindgut	52 ± 4	4 of 4	1.48	Up
Larval fat body	40 ± 2	4 of 4	1.10	None
Larval trachea	22 ± 8	4 of 4	0.64	None
Larval carcass	29 ± 1	4 of 4	0.85	None
S2 cells (growing)	30 ± 0	4 of 4	0.87	None
Whole fly	35 ± 4	4 of 4

(CG4662):

Annotation Number : CG4662
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038735
Gbrowse : chr3R:15673044-15678698 (+) // 100.0 //
Probeset : 1626421_at
Accessions : protein= NP_001163657; /// NP_650833; /// NP_732455;, nucleotide= NM_001170186; /// NM_142576; /// NM_169877;
Interpro : 0005509 // calcium ion binding // inferred from electronic annotation
FlyMine data for FBgn0038735.
VDRC has 4 RNAi stocks for FBgn0038735 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	18 ± 0	4 of 4	0.50	Down
Head	13 ± 1	4 of 4	0.40	Down
Eye	11 ± 1	4 of 4	0.32	Down
Thoracicoabdominal ganglion	13 ± 1	4 of 4	0.40	Down
Salivary gland	30 ± 2	3 of 4	0.86	None
Crop	10 ± 1	3 of 4	0.30	Down
Midgut	12 ± 0	4 of 4	0.40	Down
Tubule	9 ± 1	1 of 4	0.30	Down
Hindgut	10 ± 1	4 of 4	0.30	Down
Heart	11 ± 2	4 of 4	0.33	Down
Fat body	22 ± 2	4 of 4	0.63	Down
Ovary	107 ± 2	4 of 4	3.00	Up
Testis	23 ± 2	4 of 4	0.70	Down
Male accessory glands	76 ± 3	4 of 4	2.10	Up
Virgin spermatheca	33 ± 3	4 of 4	0.93	None
Mated spermatheca	42 ± 3	4 of 4	1.17	None
Adult carcass	17 ± 1	1 of 4	0.50	Down
Larval CNS	52 ± 1	4 of 4	1.46	Up
Larval Salivary gland	133 ± 6	4 of 4	3.71	Up
Larval midgut	19 ± 2	4 of 4	0.55	Down
Larval tubule	11 ± 2	1 of 4	0.30	Down
Larval hindgut	18 ± 2	4 of 4	0.52	Down
Larval fat body	52 ± 5	4 of 4	1.50	Up
Larval trachea	98 ± 9	4 of 4	2.75	Up
Larval carcass	48 ± 2	4 of 4	1.34	Up
S2 cells (growing)	113 ± 3	4 of 4	3.17	Up
Whole fly	35 ± 1	4 of 4

Looking for FBgn0038735. 3 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720