FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038742 through 18771 annotations produced 1 hits

Arc42 (Arc42):

Annotation Number : CG4703
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038742
Gbrowse : chr3R:15703469-15705034 (+) // 100.0 //
Probeset : 1640900_at
Accessions : protein= NP_650840;, nucleotide= NM_142583;
Pathway : 0016592 // mediator complex // inferred from sequence or structural similarity
Interpro : "0003995 // acyl-CoA dehydrogenase activity // inferred from sequence or structural similarity /// 0003995 // acyl-CoA d
FlyMine data for FBgn0038742.
BDGP gene expression has embryonic in situ data for Arc42: 4 pix of staining in 1 body parts.
Homophila reports that CG4703 is a close match (1e-37) to human gene GCDH (NP_039663), a gene associated with Glutaricaciduria, type I, 231670 (3).
TRiP has 1 RNAi stocks for FBgn0038742 available for purchase.
VDRC has 3 RNAi stocks for FBgn0038742 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	89 ± 3	4 of 4	0.40	Down
Head	246 ± 12	4 of 4	1.20	None
Eye	119 ± 7	4 of 4	0.57	Down
Thoracicoabdominal ganglion	112 ± 1	4 of 4	0.50	Down
Salivary gland	101 ± 9	4 of 4	0.49	Down
Crop	339 ± 9	4 of 4	1.60	Up
Midgut	161 ± 8	4 of 4	0.80	Down
Tubule	210 ± 5	4 of 4	1.00	None
Hindgut	290 ± 5	4 of 4	1.40	Up
Heart	394 ± 18	4 of 4	1.89	Up
Fat body	493 ± 59	4 of 4	2.37	Up
Ovary	259 ± 5	4 of 4	1.20	Up
Testis	42 ± 1	4 of 4	0.20	Down
Male accessory glands	62 ± 6	4 of 4	0.30	Down
Virgin spermatheca	853 ± 20	4 of 4	4.09	Up
Mated spermatheca	672 ± 79	4 of 4	3.23	Up
Adult carcass	350 ± 14	4 of 4	1.70	Up
Larval CNS	146 ± 10	4 of 4	0.70	Down
Larval Salivary gland	100 ± 9	4 of 4	0.48	Down
Larval midgut	114 ± 7	4 of 4	0.55	Down
Larval tubule	190 ± 4	4 of 4	0.90	None
Larval hindgut	200 ± 10	4 of 4	0.96	None
Larval fat body	653 ± 49	4 of 4	3.10	Up
Larval trachea	238 ± 23	4 of 4	1.14	None
Larval carcass	223 ± 4	4 of 4	1.07	None
S2 cells (growing)	281 ± 4	4 of 4	1.35	Up
Whole fly	208 ± 9	4 of 4

Looking for FBgn0038742. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720