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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0038798 through 18771 annotations produced 1 hits



Odorant receptor 92a (Or92a):

Annotation Number : CG17916
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038798
Gbrowse : chr3R:16330509-16331908 (+) // 100.0 //
Probeset : 1639334_at
Accessions : protein= NP_524414;, nucleotide= NM_079690;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0038798.
VDRC has 2 RNAi stocks for FBgn0038798 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain8 ± 11 of 4 1.30None
Head23 ± 14 of 4 3.70Up
Eye2 ± 00 of 4 0.45None
Thoracicoabdominal ganglion4 ± 10 of 4 0.70None
Salivary gland8 ± 21 of 4 1.38None
Crop9 ± 13 of 4 1.50None
Midgut4 ± 20 of 4 0.70None
Tubule5 ± 00 of 4 0.90None
Hindgut3 ± 00 of 4 0.50None
Heart3 ± 00 of 4 0.58None
Fat body11 ± 30 of 4 1.87Up
Ovary1 ± 00 of 4 0.30Down
Testis5 ± 10 of 4 0.90None
Male accessory glands10 ± 11 of 4 1.70None
Virgin spermatheca5 ± 00 of 4 0.85None
Mated spermatheca6 ± 11 of 4 1.03None
Adult carcass6 ± 20 of 4 1.00None
Larval CNS3 ± 00 of 4 0.60None
Larval Salivary gland7 ± 21 of 4 1.20None
Larval midgut5 ± 20 of 4 0.83None
Larval tubule6 ± 10 of 4 1.10None
Larval hindgut3 ± 00 of 4 0.51None
Larval fat body6 ± 21 of 4 1.00None
Larval trachea1 ± 10 of 4 0.31Down
Larval carcass3 ± 10 of 4 0.64None
S2 cells (growing)3 ± 00 of 4 0.54None
Whole fly6 ± 11 of 4

Looking for FBgn0038798. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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