FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038805 through 18771 annotations produced 1 hits

mitochondrial transcription factor A (TFAM):

Annotation Number : CG4217
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038805
Gbrowse : chr3R:16401072-16402741 (-) // 100.0 //
Probeset : 1635825_a_at
Accessions : protein= NP_524415; /// NP_732527;, nucleotide= NM_079691; /// NM_169906;
Pathway : DNA-dependent // inferred from sequence or structural similarity"
Interpro : 0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay ///
FlyMine data for FBgn0038805.
BDGP gene expression has embryonic in situ data for TFAM: 46 pix of staining in 16 body parts.
BioGrid reports that CG4217 interacts with CG6972 CG7347 CG9014 .
TRiP has 1 RNAi stocks for FBgn0038805 available for purchase.
VDRC has 2 RNAi stocks for FBgn0038805 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	123 ± 3	4 of 4	0.50	Down
Head	108 ± 9	4 of 4	0.40	Down
Eye	105 ± 3	4 of 4	0.42	Down
Thoracicoabdominal ganglion	105 ± 7	4 of 4	0.40	Down
Salivary gland	157 ± 17	4 of 4	0.62	Down
Crop	88 ± 5	4 of 4	0.30	Down
Midgut	102 ± 7	4 of 4	0.40	Down
Tubule	158 ± 5	4 of 4	0.60	Down
Hindgut	123 ± 2	4 of 4	0.50	Down
Heart	154 ± 4	4 of 4	0.61	Down
Fat body	116 ± 9	4 of 4	0.46	Down
Ovary	374 ± 5	4 of 4	1.50	Up
Testis	85 ± 4	4 of 4	0.30	Down
Male accessory glands	163 ± 6	4 of 4	0.60	Down
Virgin spermatheca	84 ± 2	4 of 4	0.34	Down
Mated spermatheca	84 ± 5	4 of 4	0.33	Down
Adult carcass	177 ± 5	4 of 4	0.70	Down
Larval CNS	296 ± 16	4 of 4	1.17	None
Larval Salivary gland	212 ± 6	4 of 4	0.84	None
Larval midgut	81 ± 3	4 of 4	0.32	Down
Larval tubule	78 ± 1	4 of 4	0.30	Down
Larval hindgut	144 ± 7	4 of 4	0.57	Down
Larval fat body	106 ± 2	4 of 4	0.40	Down
Larval trachea	177 ± 19	4 of 4	0.70	Down
Larval carcass	149 ± 9	4 of 4	0.59	Down
S2 cells (growing)	269 ± 3	4 of 4	1.07	None
Whole fly	252 ± 20	4 of 4

Looking for FBgn0038805. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720