FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038834 through 18771 annotations produced 2 hits

Ribosomal protein S30 (RpS30):

Annotation Number : CG15697
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038834
Gbrowse : chr3R:16676270-16677156 (+) // 100.0 //
Probeset : 1623997_s_at
Accessions : protein= NP_650922; /// NP_732566;, nucleotide= NM_142665; /// NM_169933;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct as
Interpro : 0003735 // structural constituent of ribosome // inferred from sequence or structural similarity /// 0003735 // structur
FlyMine data for FBgn0038834.
BDGP gene expression has embryonic in situ data for CG15697: 8 pix of staining in 1 body parts.
BioGrid reports that CG15697 interacts with CG32698 CG3771 .
TRiP has 1 RNAi stocks for FBgn0038834 available for purchase.
VDRC has 3 RNAi stocks for FBgn0038834 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2968 ± 61	4 of 4	0.90	None
Head	3943 ± 172	4 of 4	1.20	Up
Eye	6341 ± 72	4 of 4	1.93	Up
Thoracicoabdominal ganglion	4118 ± 93	4 of 4	1.30	Up
Salivary gland	8655 ± 226	4 of 4	2.63	Up
Crop	4186 ± 169	4 of 4	1.30	Up
Midgut	3891 ± 73	4 of 4	1.20	Up
Tubule	2701 ± 42	4 of 4	0.80	Down
Hindgut	4005 ± 57	4 of 4	1.20	Up
Heart	5804 ± 446	4 of 4	1.77	Up
Fat body	4511 ± 540	4 of 4	1.37	Up
Ovary	2757 ± 72	4 of 4	0.80	Down
Testis	1072 ± 9	4 of 4	0.30	Down
Male accessory glands	7100 ± 329	4 of 4	2.20	Up
Virgin spermatheca	3070 ± 161	4 of 4	0.93	None
Mated spermatheca	3270 ± 143	4 of 4	0.99	None
Adult carcass	4786 ± 182	4 of 4	1.50	Up
Larval CNS	2318 ± 134	4 of 4	0.71	Down
Larval Salivary gland	6651 ± 283	4 of 4	2.02	Up
Larval midgut	3260 ± 74	4 of 4	0.99	None
Larval tubule	3733 ± 36	4 of 4	1.10	Up
Larval hindgut	3529 ± 61	4 of 4	1.07	None
Larval fat body	4999 ± 585	4 of 4	1.50	None
Larval trachea	5760 ± 109	4 of 4	1.75	Up
Larval carcass	3643 ± 218	4 of 4	1.11	None
S2 cells (growing)	4086 ± 89	4 of 4	1.24	Up
Whole fly	3287 ± 135	4 of 4

Ribosomal protein S30 (RpS30):

Annotation Number : CG15697
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038834
Gbrowse : chr3R:16676270-16677156 (+) // 100.0 //
Probeset : 1625943_at
Accessions : protein= NP_650922; /// NP_732566;, nucleotide= NM_142665; /// NM_169933;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct as
Interpro : 0003735 // structural constituent of ribosome // inferred from sequence or structural similarity /// 0003735 // structur
FlyMine data for FBgn0038834.
BDGP gene expression has embryonic in situ data for CG15697: 8 pix of staining in 1 body parts.
BioGrid reports that CG15697 interacts with CG32698 CG3771 .
TRiP has 1 RNAi stocks for FBgn0038834 available for purchase.
VDRC has 3 RNAi stocks for FBgn0038834 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	16 ± 1	4 of 4	0.20	Down
Head	34 ± 4	4 of 4	0.40	Down
Eye	28 ± 1	4 of 4	0.37	Down
Thoracicoabdominal ganglion	24 ± 3	4 of 4	0.30	Down
Salivary gland	77 ± 19	4 of 4	0.99	None
Crop	40 ± 0	4 of 4	0.50	Down
Midgut	151 ± 7	4 of 4	2.00	Up
Tubule	10 ± 1	1 of 4	0.10	Down
Hindgut	49 ± 6	4 of 4	0.60	None
Heart	27 ± 2	4 of 4	0.35	Down
Fat body	90 ± 24	4 of 4	1.16	None
Ovary	125 ± 10	4 of 4	1.60	Up
Testis	29 ± 1	4 of 4	0.40	Down
Male accessory glands	117 ± 2	4 of 4	1.50	Up
Virgin spermatheca	16 ± 1	1 of 4	0.21	Down
Mated spermatheca	14 ± 1	0 of 4	0.19	Down
Adult carcass	46 ± 8	4 of 4	0.60	None
Larval CNS	40 ± 11	4 of 4	0.52	Down
Larval Salivary gland	92 ± 13	4 of 4	1.19	None
Larval midgut	70 ± 4	4 of 4	0.90	None
Larval tubule	28 ± 5	4 of 4	0.40	Down
Larval hindgut	49 ± 4	4 of 4	0.64	None
Larval fat body	58 ± 6	4 of 4	0.70	None
Larval trachea	70 ± 12	4 of 4	0.90	None
Larval carcass	118 ± 18	4 of 4	1.53	None
S2 cells (growing)	43 ± 4	4 of 4	0.56	None
Whole fly	77 ± 11	4 of 4

Looking for FBgn0038834. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720